Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12690 and 12691 are separated by 372 nucleotides12691 and 12692 are separated by 281 nucleotides12692 and 12693 are separated by 764 nucleotides12693 and 12694 are separated by 451 nucleotides mRNA_4322: 12690 - KOG0254 Predicted transporter (major facilitator superfamily), at 1,905,474 to 1,907,958 12690 mRNA_4323: 12691 - KOG1198 Zinc-binding oxidoreductase, at 1,908,331 to 1,909,628 12691 mRNA_4324: 12692 - K18754 LIN28 protein lin-28, at 1,909,910 to 1,911,534 12692 mRNA_4325: 12693 - K03231 EEF1A elongation factor 1-alpha, at 1,912,299 to 1,914,440 12693 mRNA_4326: 12694 - Hypothetical Protein, at 1,914,892 to 1,915,200 12694
Group Condition mRNA_4322 mRNA_4323 mRNA_4324 mRNA_4325 mRNA_4326
12690 12691 12692 12693 12694
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -1.4 -0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.6 -0.3 N.D. -0.5
growth on ypd YPD -0.1 -0.7 -0.8 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.5 -0.3 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.5 -0.4 N.D. -0.1
auxotrophy Dropout Complete +0.1 -0.6 -0.1 N.D. -0.2
growth on oleic acid YNB Glucose +0.0 +0.3 -0.5 N.D. -0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 +0.0 N.D. -0.4
growth on oleic acid YNB Oleic Acid +0.2 -0.2 -0.1 N.D. -0.4
auxotrophy YNB Glucose +0.0 -0.4 +0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 -0.1 N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.1 +0.0 N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.4 -0.2 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.0 -0.6 N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.2 N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.0 -0.0 -0.2 N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.6 +0.1 -0.0 N.D. +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 +0.0 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.3 +0.1 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.2 +0.0 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.9 -0.1 +0.1 N.D. -0.0
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