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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12690 and 12691 are separated by 372 nucleotides
12691 and 12692 are separated by 281 nucleotides
12692 and 12693 are separated by 764 nucleotides
12693 and 12694 are separated by 451 nucleotides
mRNA_4322: 12690 - KOG0254 Predicted transporter (major facilitator superfamily), at 1,905,474 to 1,907,958
12690
mRNA_4323: 12691 - KOG1198 Zinc-binding oxidoreductase, at 1,908,331 to 1,909,628
12691
mRNA_4324: 12692 - K18754 LIN28 protein lin-28, at 1,909,910 to 1,911,534
12692
mRNA_4325: 12693 - K03231 EEF1A elongation factor 1-alpha, at 1,912,299 to 1,914,440
12693
mRNA_4326: 12694 - Hypothetical Protein, at 1,914,892 to 1,915,200
12694
Group
Condition
mRNA
_4322
mRNA
_4323
mRNA
_4324
mRNA
_4325
mRNA
_4326
12690
12691
12692
12693
12694
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-1.4
-0.1
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.6
-0.3
N.D.
-0.5
growth on ypd
YPD
-0.1
-0.7
-0.8
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.5
-0.3
N.D.
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.5
-0.4
N.D.
-0.1
auxotrophy
Dropout Complete
+0.1
-0.6
-0.1
N.D.
-0.2
growth on oleic acid
YNB Glucose
+0.0
+0.3
-0.5
N.D.
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.2
+0.0
N.D.
-0.4
growth on oleic acid
YNB Oleic Acid
+0.2
-0.2
-0.1
N.D.
-0.4
auxotrophy
YNB Glucose
+0.0
-0.4
+0.1
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
-0.1
N.D.
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.1
+0.0
N.D.
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.4
-0.2
N.D.
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.0
-0.6
N.D.
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.1
-0.2
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
+0.0
-0.0
-0.2
N.D.
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
+0.1
-0.0
N.D.
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
+0.0
N.D.
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.3
+0.1
N.D.
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
+0.2
+0.0
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.9
-0.1
+0.1
N.D.
-0.0
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