Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12691 and 12692 are separated by 281 nucleotides12692 and 12693 are separated by 764 nucleotides12693 and 12694 are separated by 451 nucleotides12694 and 12695 are separated by 1230 nucleotides mRNA_4323: 12691 - KOG1198 Zinc-binding oxidoreductase, at 1,908,331 to 1,909,628 12691 mRNA_4324: 12692 - K18754 LIN28 protein lin-28, at 1,909,910 to 1,911,534 12692 mRNA_4325: 12693 - K03231 EEF1A elongation factor 1-alpha, at 1,912,299 to 1,914,440 12693 mRNA_4326: 12694 - Hypothetical Protein, at 1,914,892 to 1,915,200 12694 mRNA_4327: 12695 - K18754 LIN28 protein lin-28, at 1,916,431 to 1,918,530 12695
Group Condition mRNA_4323 mRNA_4324 mRNA_4325 mRNA_4326 mRNA_4327
12691 12692 12693 12694 12695
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 -0.1 N.D. -0.2 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.3 N.D. -0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.3 N.D. -0.4 -0.3
auxotrophy Dropout Complete -0.6 -0.1 N.D. -0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.4 N.D. -0.1 -0.1
growth on ypd YPD -0.7 -0.8 N.D. +0.2 +0.1
growth on oleic acid YNB Oleic Acid -0.2 -0.1 N.D. -0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.6 N.D. +0.0 -0.2
auxotrophy YNB Glucose -0.4 +0.1 N.D. -0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.0 N.D. -0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 N.D. -0.1 -0.3
growth on oleic acid YNB Glucose +0.3 -0.5 N.D. -0.4 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.0 N.D. -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 N.D. -0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.0 -0.2 N.D. +0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.2 N.D. +0.2 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 N.D. -0.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 N.D. +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.1 N.D. -0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.0 N.D. +0.4 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.0 N.D. +0.1 +0.0
remove
mRNA_4323
plot
remove
mRNA_4324
plot
remove
mRNA_4325
remove
mRNA_4326
plot
remove
mRNA_4327
plot