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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12692 and 12693 are separated by 764 nucleotides
12693 and 12694 are separated by 451 nucleotides
12694 and 12695 are separated by 1230 nucleotides
12695 and 12696 are separated by 266 nucleotides
mRNA_4324: 12692 - K18754 LIN28 protein lin-28, at 1,909,910 to 1,911,534
12692
mRNA_4325: 12693 - K03231 EEF1A elongation factor 1-alpha, at 1,912,299 to 1,914,440
12693
mRNA_4326: 12694 - Hypothetical Protein, at 1,914,892 to 1,915,200
12694
mRNA_4327: 12695 - K18754 LIN28 protein lin-28, at 1,916,431 to 1,918,530
12695
mRNA_4328: 12696 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1,918,797 to 1,920,453
12696
Group
Condition
mRNA
_4324
mRNA
_4325
mRNA
_4326
mRNA
_4327
mRNA
_4328
12692
12693
12694
12695
12696
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
N.D.
+0.1
+0.0
-1.8
growth on oleic acid
YNB Glucose
-0.5
N.D.
-0.4
+0.0
-0.4
growth on oleic acid
YNB Oleic Acid
-0.1
N.D.
-0.4
-0.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.2
N.D.
-0.1
-0.3
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
N.D.
+0.0
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
N.D.
-0.1
-0.1
-0.1
growth on ypd
YPD
-0.8
N.D.
+0.2
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
-0.4
-0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
N.D.
+0.4
-0.3
-0.7
auxotrophy
Dropout Complete
-0.1
N.D.
-0.2
-0.4
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.0
N.D.
-0.5
-0.2
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
N.D.
-0.0
+0.0
-0.4
auxotrophy
YNB Glucose
+0.1
N.D.
-0.2
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
N.D.
-0.5
-0.1
+0.6
growth on ricinoleic acid
YNB Glucose
-0.2
N.D.
+0.1
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
N.D.
-0.4
-0.3
+1.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
N.D.
-0.2
-0.1
+0.8
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
N.D.
+0.2
+0.2
+0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.0
N.D.
+0.1
-0.1
+0.7
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
-0.2
-0.1
+1.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
N.D.
-0.2
-0.5
+1.9
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