Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12696 and 12697 are separated by 677 nucleotides12697 and 12698 are separated by 590 nucleotides12698 and 12699 are separated by 221 nucleotides12699 and 12700 are separated by 387 nucleotides mRNA_4328: 12696 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 1,918,797 to 1,920,453 12696 mRNA_4329: 12697 - KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1), at 1,921,131 to 1,925,118 12697 mRNA_4330: 12698 - K18738 HEK2, KHD1 heterogeneous nuclear rnp K-like protein 2, at 1,925,709 to 1,927,416 12698 mRNA_4331: 12699 - K15262 BCP1, BCCIP protein BCP1, at 1,927,638 to 1,928,975 12699 mRNA_4332: 12700 - K02912 RP-L32e, RPL32 large subunit ribosomal protein L32e, at 1,929,363 to 1,930,179 12700
Group Condition mRNA_4328 mRNA_4329 mRNA_4330 mRNA_4331 mRNA_4332
12696 12697 12698 12699 12700
facs on lipid accumulation Sorted Low BODIPY Gate -1.8 N.D. -0.9 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.5 N.D. -1.4 N.D. N.D.
auxotrophy Dropout Complete +0.3 N.D. -1.7 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. -1.3 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.7 N.D. -0.6 N.D. N.D.
growth on oleic acid YNB Glucose -0.4 N.D. -0.8 N.D. N.D.
auxotrophy YNB Glucose +0.2 N.D. -1.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.3 N.D. -0.8 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. -0.9 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. -0.6 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.2 N.D. -1.1 N.D. N.D.
growth on ypd YPD -0.2 N.D. -0.7 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.8 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. -0.7 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 N.D. -0.3 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.4 N.D. +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 N.D. -0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.2 N.D. -0.2 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.7 N.D. +0.3 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +1.0 N.D. +0.3 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +1.9 N.D. +0.4 N.D. N.D.
remove
mRNA_4328
plot		 remove
mRNA_4329
plot		 remove
mRNA_4330		 remove
mRNA_4331
plot		 remove
mRNA_4332
plot