Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12707 and 12708 are separated by 423 nucleotides12708 and 12709 are separated by 62 nucleotides12709 and 12710 are separated by 498 nucleotides12710 and 12711 are separated by 498 nucleotides mRNA_4339: 12707 - K17677 IRC3 ATP-dependent helicase IRC3, at 1,943,840 to 1,947,247 12707 mRNA_4340: 12708 - K01074 PPT palmitoyl-protein thioesterase, at 1,947,671 to 1,949,110 12708 mRNA_4341: 12709 - K08266 MLST8, GBL target of rapamycin complex subunit LST8, at 1,949,173 to 1,951,155 12709 mRNA_4342: 12710 - K08801 PASK PAS domain containing serine/threonine kinase, at 1,951,654 to 1,955,244 12710 mRNA_4343: 12711 - K15206 TFC7 transcription factor C subunit 7, at 1,955,743 to 1,957,166 12711
Group Condition mRNA_4339 mRNA_4340 mRNA_4341 mRNA_4342 mRNA_4343
12707 12708 12709 12710 12711
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.5 N.D. -0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.6 N.D. +0.2 -0.1
auxotrophy YNB Glucose -0.1 -0.3 N.D. -0.1 -0.0
growth on ricinoleic acid YNB Glucose -0.0 -0.4 N.D. -0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.9 N.D. +0.6 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.2 N.D. +0.1 -0.0
growth on ypd YPD -0.1 -0.3 N.D. -0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.3 N.D. -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 N.D. -0.0 +0.2
auxotrophy Dropout Complete +0.1 -0.4 N.D. +0.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +0.3 N.D. +0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 N.D. +0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.4 N.D. +0.5 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.4 N.D. +0.0 +0.4
growth on oleic acid YNB Glucose +0.1 -0.5 N.D. +0.1 +0.4
growth on oleic acid YNB Oleic Acid +0.1 -0.3 N.D. +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 N.D. +0.2 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.2 N.D. +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.1 N.D. +0.2 +0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 N.D. +0.4 +0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.6 N.D. +0.1 +0.9
remove
mRNA_4339
plot
remove
mRNA_4340
plot
remove
mRNA_4341
remove
mRNA_4342
plot
remove
mRNA_4343
plot