Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12708 and 12709 are separated by 62 nucleotides12709 and 12710 are separated by 498 nucleotides12710 and 12711 are separated by 498 nucleotides12711 and 12712 are separated by 520 nucleotides mRNA_4340: 12708 - K01074 PPT palmitoyl-protein thioesterase, at 1,947,671 to 1,949,110 12708 mRNA_4341: 12709 - K08266 MLST8, GBL target of rapamycin complex subunit LST8, at 1,949,173 to 1,951,155 12709 mRNA_4342: 12710 - K08801 PASK PAS domain containing serine/threonine kinase, at 1,951,654 to 1,955,244 12710 mRNA_4343: 12711 - K15206 TFC7 transcription factor C subunit 7, at 1,955,743 to 1,957,166 12711 mRNA_4344: 12712 - HMMPfam-Secretory lipase-PF03583,SUPERFAMILY--SSF53474, at 1,957,687 to 1,959,260 12712
Group Condition mRNA_4340 mRNA_4341 mRNA_4342 mRNA_4343 mRNA_4344
12708 12709 12710 12711 12712
facs on lipid accumulation Sorted High BODIPY Gate -0.5 N.D. -0.3 -0.4 -0.6
growth on ricinoleic acid YNB Glucose -0.4 N.D. -0.0 -0.0 -0.4
auxotrophy YNB Glucose -0.3 N.D. -0.1 -0.0 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.6 N.D. +0.2 -0.1 -0.0
auxotrophy Dropout Complete -0.4 N.D. +0.1 +0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 N.D. +0.6 -0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.3 N.D. +0.2 +0.1 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. -0.0 +0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. +0.5 -0.1 -0.3
growth on oleic acid YNB Glucose -0.5 N.D. +0.1 +0.4 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.4 N.D. +0.0 +0.4 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. +0.1 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. -0.1 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. +0.2 +0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.3 -0.1 +0.2
growth on ypd YPD -0.3 N.D. -0.0 +0.2 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 N.D. +0.3 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. +0.2 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. +0.2 +0.7 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 N.D. +0.1 +0.9 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. +0.4 +0.8 +0.4
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