Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12709 and 12710 are separated by 498 nucleotides12710 and 12711 are separated by 498 nucleotides12711 and 12712 are separated by 520 nucleotides12712 and 12713 are separated by 590 nucleotides mRNA_4341: 12709 - K08266 MLST8, GBL target of rapamycin complex subunit LST8, at 1,949,173 to 1,951,155 12709 mRNA_4342: 12710 - K08801 PASK PAS domain containing serine/threonine kinase, at 1,951,654 to 1,955,244 12710 mRNA_4343: 12711 - K15206 TFC7 transcription factor C subunit 7, at 1,955,743 to 1,957,166 12711 mRNA_4344: 12712 - HMMPfam-Secretory lipase-PF03583,SUPERFAMILY--SSF53474, at 1,957,687 to 1,959,260 12712 mRNA_4345: 12713 - K04706 PIAS1 E3 SUMO-protein ligase PIAS1, at 1,959,851 to 1,962,070 12713
Group Condition mRNA_4341 mRNA_4342 mRNA_4343 mRNA_4344 mRNA_4345
12709 12710 12711 12712 12713
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 -0.4 -0.6 -2.1
auxotrophy Dropout Complete N.D. +0.1 +0.1 -0.2 -2.0
auxotrophy YNB Glucose N.D. -0.1 -0.0 -0.3 -0.5
growth on ypd YPD N.D. -0.0 +0.2 +0.4 -1.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 -0.1 -0.0 -0.9
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.6 -0.1 -0.0 -1.3
growth on oleic acid YNB Oleic Acid N.D. +0.2 +0.1 -0.5 -0.4
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 +0.1 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 +0.9 +0.3 -1.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 +0.2 +0.3 -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 +0.2 -0.2 -0.2
growth on ricinoleic acid YNB Glucose N.D. -0.0 -0.0 -0.4 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 +0.4 -0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 +0.0 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 -0.0 -0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.5 -0.1 -0.3 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 -0.1 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 -0.1 +0.2 +0.0
growth on oleic acid YNB Glucose N.D. +0.1 +0.4 -0.3 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.4 +0.8 +0.4 -1.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 +0.7 +0.6 -0.7
remove
mRNA_4341
plot
remove
mRNA_4342
plot
remove
mRNA_4343
remove
mRNA_4344
plot
remove
mRNA_4345
plot