Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12713 and 12714 are separated by 763 nucleotides12714 and 12715 are separated by 496 nucleotides12715 and 12716 are separated by 442 nucleotides12716 and 12717 are separated by 1108 nucleotides mRNA_4345: 12713 - K04706 PIAS1 E3 SUMO-protein ligase PIAS1, at 1,959,851 to 1,962,070 12713 mRNA_4346: 12714 - K18754 LIN28 protein lin-28, at 1,962,834 to 1,965,398 12714 mRNA_4347: 12715 - K03386 PRDX2_4, ahpC peroxiredoxin (alkyl hydroperoxide reductase subunit C), at 1,965,895 to 1,967,093 12715 mRNA_4348: 12716 - KOG2265 Nuclear distribution protein NUDC, at 1,967,536 to 1,968,862 12716 mRNA_4349: 12717 - K02873 RP-L13e, RPL13 large subunit ribosomal protein L13e, at 1,969,971 to 1,971,273 12717
Group Condition mRNA_4345 mRNA_4346 mRNA_4347 mRNA_4348 mRNA_4349
12713 12714 12715 12716 12717
auxotrophy Dropout Complete -2.0 +0.1 -0.5 N.D. -0.7
auxotrophy YNB Glucose -0.5 -0.0 -1.0 N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.0 -0.8 N.D. -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.5 -0.2 -0.5 N.D. +0.8
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.3 -0.5 N.D. -1.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.3 +0.0 -0.6 N.D. +0.6
growth on ypd YPD -1.5 +0.1 -0.2 N.D. +0.5
growth on ricinoleic acid YNB Glucose +0.2 -0.4 -1.0 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.3 -0.7 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.1 -0.7 N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.1 -0.3 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate -2.1 +0.1 +0.4 N.D. +0.9
growth on oleic acid YNB Oleic Acid -0.4 +0.1 -1.1 N.D. +0.9
facs on lipid accumulation Sorted No BODIPY Gate -0.9 +0.1 -0.3 N.D. +0.6
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.5 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 +0.0 -0.6 N.D. +1.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.0 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 -0.3 N.D. +0.8
growth on oleic acid YNB Glucose +0.2 +0.2 -0.8 N.D. +0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.9 +0.4 -0.4 N.D. +1.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.1 -0.0 -0.0 N.D. +2.1
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