Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12714 and 12715 are separated by 496 nucleotides
12715 and 12716 are separated by 442 nucleotides
12716 and 12717 are separated by 1108 nucleotides
12717 and 12718 are separated by 322 nucleotides
mRNA_4346: 12714 - K18754 LIN28 protein lin-28, at 1,962,834 to 1,965,398
12714
mRNA_4347: 12715 - K03386 PRDX2_4, ahpC peroxiredoxin (alkyl hydroperoxide reductase subunit C), at 1,965,895 to 1,967,093
12715
mRNA_4348: 12716 - KOG2265 Nuclear distribution protein NUDC, at 1,967,536 to 1,968,862
12716
mRNA_4349: 12717 - K02873 RP-L13e, RPL13 large subunit ribosomal protein L13e, at 1,969,971 to 1,971,273
12717
mRNA_4350: 12718 - K03635 MOCS2, moaE molybdopterin synthase catalytic subunit, at 1,971,596 to 1,972,460
12718
Group
Condition
mRNA
_4346
mRNA
_4347
mRNA
_4348
mRNA
_4349
mRNA
_4350
12714
12715
12716
12717
12718
auxotrophy
YNB Glucose
-0.0
-1.0
N.D.
-0.4
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.8
N.D.
-0.5
-0.1
growth on ricinoleic acid
YNB Glucose
-0.4
-1.0
N.D.
+0.2
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.5
N.D.
-1.1
+0.3
auxotrophy
Dropout Complete
+0.1
-0.5
N.D.
-0.7
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.7
N.D.
-0.0
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.3
N.D.
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.7
N.D.
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.5
N.D.
+0.3
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
-1.1
N.D.
+0.9
-0.2
growth on oleic acid
YNB Glucose
+0.2
-0.8
N.D.
+0.8
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.6
N.D.
+0.6
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.5
N.D.
+0.8
+0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.0
N.D.
+0.1
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.3
N.D.
+0.6
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.3
N.D.
+0.8
-0.1
growth on ypd
YPD
+0.1
-0.2
N.D.
+0.5
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
-0.6
N.D.
+1.0
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
+0.4
N.D.
+0.9
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
-0.4
N.D.
+1.7
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.0
N.D.
+2.1
+0.5
remove
mRNA_4346
plot
remove
mRNA_4347
plot
remove
mRNA_4348
remove
mRNA_4349
plot
remove
mRNA_4350
plot