Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12727 and 12728 are separated by 227 nucleotides12728 and 12729 are separated by 1274 nucleotides12729 and 12730 are separated by 1141 nucleotides12730 and 12731 are separated by 639 nucleotides mRNA_4359: 12727 - Hypothetical Protein, at 194 to 736 12727 mRNA_4360: 12728 - Hypothetical Protein, at 964 to 3,087 12728 mRNA_4361: 12729 - K10576 UBE2H, UBC8 ubiquitin-conjugating enzyme E2 H, at 4,362 to 5,348 12729 mRNA_4362: 12730 - KOG0907 Thioredoxin, at 6,490 to 7,048 12730 mRNA_4363: 12731 - K19562 BIO3-BIO1 bifunctional dethiobiotin synthetase / adenosylmethionine---8-amino-7-oxononanoate aminotransferase, at 7,688 to 10,353 12731
Group Condition mRNA_4359 mRNA_4360 mRNA_4361 mRNA_4362 mRNA_4363
12727 12728 12729 12730 12731
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.1 -1.5 -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.1 -0.8 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.0 -0.2 -0.4 N.D.
growth on ricinoleic acid YNB Glucose -0.1 -0.2 -0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.2 -0.3 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.1 -0.5 +0.3 N.D.
auxotrophy Dropout Complete +0.0 -0.1 +0.1 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.0 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 -0.1 +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.1 -0.3 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.2 -0.6 +0.3 N.D.
auxotrophy YNB Glucose +0.1 -0.2 +0.2 +0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.0 -0.0 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.0 -0.4 +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.2 -0.4 +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 +0.1 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.1 +0.1 +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 +0.2 +0.2 N.D.
growth on ypd YPD +0.2 -0.1 +0.9 -0.4 N.D.
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.2 +0.3 N.D.
growth on oleic acid YNB Glucose +0.2 +0.0 -0.1 +0.5 N.D.
remove
mRNA_4359
plot
remove
mRNA_4360
plot
remove
mRNA_4361
remove
mRNA_4362
plot
remove
mRNA_4363
plot