Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12733 and 12734 are separated by 354 nucleotides12734 and 12735 are separated by 78 nucleotides12735 and 12736 are separated by 97 nucleotides12736 and 12737 are separated by 1074 nucleotides mRNA_4365: 12733 - HMMPfam-Zinc finger, C3HC4 type (RING finger)-PF13920, at 18,950 to 21,856 12733 mRNA_4366: 12734 - K11650 SMARCD SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D, at 22,211 to 24,480 12734 mRNA_4367: 12735 - K08856 STK16 serine/threonine kinase 16, at 24,559 to 26,572 12735 mRNA_4368: 12736 - K00652 bioF 8-amino-7-oxononanoate synthase, at 26,670 to 28,178 12736 mRNA_4369: 12737 - K03671 trxA thioredoxin 1, at 29,253 to 29,815 12737
Group Condition mRNA_4365 mRNA_4366 mRNA_4367 mRNA_4368 mRNA_4369
12733 12734 12735 12736 12737
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 N.D. -0.4 N.D. -2.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 N.D. -0.0 N.D. -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.6 N.D. -0.0 N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.3 N.D. -0.3 N.D. -0.3
auxotrophy YNB Glucose -0.1 N.D. +0.1 N.D. -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. +0.8 N.D. -1.5
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. +0.2 N.D. -0.8
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.0 N.D. -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.3 N.D. +0.0
growth on ypd YPD -0.1 N.D. +0.3 N.D. -0.5
growth on oleic acid YNB Glucose +0.1 N.D. +0.2 N.D. -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.6 N.D. -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.5 N.D. -0.1 N.D. +0.8
growth on oleic acid YNB Oleic Acid +0.3 N.D. +0.3 N.D. -0.4
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. +0.1 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.0 N.D. +0.5
auxotrophy Dropout Complete -0.2 N.D. +0.3 N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. +0.1 N.D. +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.3 N.D. +0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. +0.6 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 N.D. +0.7 N.D. +0.2
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