Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12735 and 12736 are separated by 97 nucleotides12736 and 12737 are separated by 1074 nucleotides12737 and 12738 are separated by 405 nucleotides12738 and 12739 are separated by 484 nucleotides mRNA_4367: 12735 - K08856 STK16 serine/threonine kinase 16, at 24,559 to 26,572 12735 mRNA_4368: 12736 - K00652 bioF 8-amino-7-oxononanoate synthase, at 26,670 to 28,178 12736 mRNA_4369: 12737 - K03671 trxA thioredoxin 1, at 29,253 to 29,815 12737 mRNA_4370: 12738 - HMMPfam-Purine nucleoside permease (NUP)-PF06516,PIRSF--PIRSF013171, at 30,221 to 32,027 12738 mRNA_4371: 12739 - K10877 RAD54B DNA repair and recombination protein RAD54B, at 32,512 to 35,317 12739
Group Condition mRNA_4367 mRNA_4368 mRNA_4369 mRNA_4370 mRNA_4371
12735 12736 12737 12738 12739
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. -2.9 -0.0 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. -0.7 -0.4 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.0 N.D. -0.3 -0.2 -0.3
growth on ricinoleic acid YNB Glucose -0.3 N.D. -0.3 -0.2 -0.1
growth on oleic acid YNB Glucose +0.2 N.D. -0.6 +0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. +0.0 +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. -0.4 +0.1 -0.0
auxotrophy YNB Glucose +0.1 N.D. -0.5 -0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. -0.8 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.8 N.D. -1.5 +0.5 +0.1
growth on oleic acid YNB Oleic Acid +0.3 N.D. -0.4 -0.1 +0.1
growth on ypd YPD +0.3 N.D. -0.5 +0.6 -0.4
auxotrophy Dropout Complete +0.3 N.D. +0.3 -0.8 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.1 N.D. +0.2 -0.4 +0.5
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. +0.5 -0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +0.5 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 N.D. -0.6 +0.6 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. +0.8 -0.1 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 N.D. +0.8 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 N.D. +0.2 +0.9 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 N.D. +0.4 +0.7 +0.3
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