Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12736 and 12737 are separated by 1074 nucleotides12737 and 12738 are separated by 405 nucleotides12738 and 12739 are separated by 484 nucleotides12739 and 12740 are separated by 3134 nucleotides mRNA_4368: 12736 - K00652 bioF 8-amino-7-oxononanoate synthase, at 26,670 to 28,178 12736 mRNA_4369: 12737 - K03671 trxA thioredoxin 1, at 29,253 to 29,815 12737 mRNA_4370: 12738 - HMMPfam-Purine nucleoside permease (NUP)-PF06516,PIRSF--PIRSF013171, at 30,221 to 32,027 12738 mRNA_4371: 12739 - K10877 RAD54B DNA repair and recombination protein RAD54B, at 32,512 to 35,317 12739 mRNA_4372: 12740 - KOG2533 Permease of the major facilitator superfamily, at 38,452 to 41,065 12740
Group Condition mRNA_4368 mRNA_4369 mRNA_4370 mRNA_4371 mRNA_4372
12736 12737 12738 12739 12740
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -2.9 -0.0 +0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.7 -0.4 -0.6 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -1.5 +0.5 +0.1 -0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 -0.2 -0.3 -0.2
growth on oleic acid YNB Glucose N.D. -0.6 +0.1 -0.2 -0.2
growth on ypd YPD N.D. -0.5 +0.6 -0.4 -0.4
auxotrophy Dropout Complete N.D. +0.3 -0.8 +0.4 -0.4
growth on ricinoleic acid YNB Glucose N.D. -0.3 -0.2 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 +0.0 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.4 +0.1 -0.0 -0.1
growth on oleic acid YNB Oleic Acid N.D. -0.4 -0.1 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.6 +0.6 +0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy N.D. -0.8 +0.3 +0.2 +0.3
auxotrophy YNB Glucose N.D. -0.5 -0.1 +0.3 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.5 -0.2 +0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 -0.4 +0.5 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 +0.9 +0.0 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.5 +0.2 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.4 +0.7 +0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.8 +0.2 -0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.8 -0.1 +0.4 +0.1
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