Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12737 and 12738 are separated by 405 nucleotides12738 and 12739 are separated by 484 nucleotides12739 and 12740 are separated by 3134 nucleotides12740 and 12741 are separated by 204 nucleotides mRNA_4369: 12737 - K03671 trxA thioredoxin 1, at 29,253 to 29,815 12737 mRNA_4370: 12738 - HMMPfam-Purine nucleoside permease (NUP)-PF06516,PIRSF--PIRSF013171, at 30,221 to 32,027 12738 mRNA_4371: 12739 - K10877 RAD54B DNA repair and recombination protein RAD54B, at 32,512 to 35,317 12739 mRNA_4372: 12740 - KOG2533 Permease of the major facilitator superfamily, at 38,452 to 41,065 12740 mRNA_4373: 12741 - SUPERFAMILY--SSF52058, at 41,270 to 42,990 12741
Group Condition mRNA_4369 mRNA_4370 mRNA_4371 mRNA_4372 mRNA_4373
12737 12738 12739 12740 12741
ypd buoyancy 40 hrs No Buoyancy Separation -2.9 -0.0 +0.2 -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.4 -0.6 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.5 +0.5 +0.1 -0.5 -0.1
growth on ypd YPD -0.5 +0.6 -0.4 -0.4 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.2 -0.3 -0.2 +0.2
growth on oleic acid YNB Glucose -0.6 +0.1 -0.2 -0.2 +0.1
auxotrophy Dropout Complete +0.3 -0.8 +0.4 -0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.1 -0.0 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 +0.6 +0.2 -0.4 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.0 -0.1 -0.3 +0.0
growth on ricinoleic acid YNB Glucose -0.3 -0.2 -0.1 +0.1 +0.2
growth on oleic acid YNB Oleic Acid -0.4 -0.1 +0.1 +0.1 +0.3
auxotrophy YNB Glucose -0.5 -0.1 +0.3 +0.3 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.8 +0.3 +0.2 +0.3 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.5 -0.2 +0.3 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.4 +0.5 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.9 +0.0 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.7 +0.3 -0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.8 -0.1 +0.4 +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.2 -0.0 +0.3 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 +0.2 -0.1 +0.1 +0.5
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