Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12742 and 12743 are separated by 316 nucleotides12743 and 12744 are separated by 431 nucleotides12744 and 12745 are separated by 1415 nucleotides12745 and 12746 are separated by 142 nucleotides mRNA_4374: 12742 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 43,132 to 46,033 12742 mRNA_4375: 12743 - K14209 SLC36A, PAT solute carrier family 36 (proton-coupled amino acid transporter), at 46,350 to 49,394 12743 mRNA_4376: 12744 - BLAST glycosyltransferase family 25 [Puccinia cf. psidii AE..., at 49,826 to 51,100 12744 mRNA_4377: 12745 - Hypothetical Protein, at 52,516 to 53,498 12745 mRNA_4378: 12746 - KOG2432 Uncharacterized conserved protein, at 53,641 to 56,318 12746
Group Condition mRNA_4374 mRNA_4375 mRNA_4376 mRNA_4377 mRNA_4378
12742 12743 12744 12745 12746
growth on ricinoleic acid YNB Ricinoleic Acid -2.4 +0.0 +0.2 +0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -2.0 -0.0 +0.2 +0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.8 -0.6 +0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 +0.4 -0.7 -0.4 +0.3
growth on ricinoleic acid YNB Glucose -0.2 +0.2 -0.2 -0.1 -0.6
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 -0.1 -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.0 -0.1 -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.3 -0.3 -0.3 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 +0.0 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.3 -0.1 -0.3 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 +0.1 -0.3 +0.3
growth on ypd YPD +0.2 -0.1 -0.1 +0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.2 -0.0 -0.1 +0.4
growth on oleic acid YNB Oleic Acid -0.9 +0.2 +0.8 +0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.4 +0.1 +0.1 +0.2 -0.1
auxotrophy Dropout Complete +0.1 +0.2 +0.3 -0.0 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 +0.1 -0.2 +0.1
auxotrophy YNB Glucose +0.0 +0.1 +0.1 +0.0 -0.1
growth on oleic acid YNB Glucose -0.3 +0.1 +0.6 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.1 +0.3 -0.0 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.0 +0.1 -0.1 +0.4
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