Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12748 and 12749 are separated by 160 nucleotides12749 and 12750 are separated by 343 nucleotides12750 and 12751 are separated by 277 nucleotides12751 and 12752 are separated by 321 nucleotides mRNA_4380: 12748 - K00550 OPI3 methylene-fatty-acyl-phospholipid synthase, at 58,451 to 59,547 12748 mRNA_4381: 12749 - BLAST glycosyltransferase family 25 [Puccinia cf. psidii AE..., at 59,708 to 61,504 12749 mRNA_4382: 12750 - Hypothetical Protein, at 61,848 to 63,283 12750 mRNA_4383: 12751 - Hypothetical Protein, at 63,561 to 65,177 12751 mRNA_4384: 12752 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 65,499 to 68,176 12752
Group Condition mRNA_4380 mRNA_4381 mRNA_4382 mRNA_4383 mRNA_4384
12748 12749 12750 12751 12752
facs on lipid accumulation Sorted No BODIPY Gate -2.9 +0.0 -0.0 -0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine -2.3 -0.0 +0.1 -0.6 +0.1
auxotrophy Dropout Complete -3.1 +0.3 +0.1 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.6 -0.2 -1.4 -0.2
auxotrophy YNB Glucose 75mM Methionine -2.1 -0.1 +0.2 -0.2 +0.1
growth on ricinoleic acid YNB Glucose -2.1 +0.3 +0.3 -0.3 +0.1
auxotrophy YNB Glucose -1.8 +0.1 +0.1 -0.2 +0.2
growth on oleic acid YNB Glucose -1.6 -0.1 +0.2 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.8 +0.4 +0.0 +0.4 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.6 +0.3 -0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.6 +0.4 -0.0 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0 +0.3 +0.3 -0.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.3 -0.2 -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 -0.1 -0.0 +0.0
growth on oleic acid YNB Oleic Acid -1.0 +0.6 +0.0 +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 -0.2 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.0 +0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.2 -0.0 +0.2 +0.3
growth on ypd YPD +0.1 +0.1 +0.2 +0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.7 +0.3 +0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 +1.0 +0.4 +0.3 +0.1
remove
mRNA_4380
plot
remove
mRNA_4381
plot
remove
mRNA_4382
remove
mRNA_4383
plot
remove
mRNA_4384
plot