Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12752 and 12753 are separated by 96 nucleotides12753 and 12754 are separated by 602 nucleotides12754 and 12755 are separated by 355 nucleotides12755 and 12756 are separated by 459 nucleotides mRNA_4384: 12752 - K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase, at 65,499 to 68,176 12752 mRNA_4385: 12753 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 68,273 to 69,417 12753 mRNA_4386: 12754 - BLAST polysaccharide lyase family 14 protein [Hypholoma sub..., at 70,020 to 71,335 12754 mRNA_4387: 12755 - HMMPfam-Ctf8-PF09696, at 71,691 to 72,315 12755 mRNA_4388: 12756 - KOG2084 Predicted histone tail methylase containing SET domain, at 72,775 to 74,031 12756
Group Condition mRNA_4384 mRNA_4385 mRNA_4386 mRNA_4387 mRNA_4388
12752 12753 12754 12755 12756
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.5 +0.4 -2.5 -0.7
auxotrophy Dropout Complete -0.1 +0.2 -0.5 -0.5 -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.0 -0.3 -0.6 -1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.5 -0.3 -0.6 -0.9
growth on ricinoleic acid YNB Glucose +0.1 +0.2 -0.1 -0.9 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.1 -0.1 -0.9 -0.5
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 -0.3 -0.0 -0.9
auxotrophy YNB Glucose +0.2 +0.1 -0.4 -0.3 -0.4
growth on ypd YPD -0.1 -0.1 -0.1 -0.5 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.8 +0.3 -1.5 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.1 -0.3 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.2 +0.3 -0.8 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.6 -0.8 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.4 +0.4 -0.8 -0.4
growth on oleic acid YNB Glucose -0.1 +0.3 -0.3 +0.0 +0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.2 -0.1 -0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.4 -0.1 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.3 -0.3 +0.7 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 -0.0 +1.0 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.3 -0.2 +0.7 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.3 +0.2 +1.5 +0.9
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