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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12756 and 12757 are separated by 358 nucleotides
12757 and 12758 are separated by 711 nucleotides
12758 and 12759 are separated by 884 nucleotides
12759 and 12760 overlap by 4 nucleotides
mRNA_4388: 12756 - KOG2084 Predicted histone tail methylase containing SET domain, at 72,775 to 74,031
12756
mRNA_4389: 12757 - K10735 GINS4, SLD5 GINS complex subunit 4, at 74,390 to 75,580
12757
mRNA_4390: 12758 - K16261 YAT yeast amino acid transporter, at 76,292 to 78,680
12758
mRNA_4391: 12759 - Hypothetical Protein, at 79,565 to 80,188
12759
mRNA_4392: 12760 - KOG3069 Peroxisomal NUDIX hydrolase, at 80,185 to 81,389
12760
Group
Condition
mRNA
_4388
mRNA
_4389
mRNA
_4390
mRNA
_4391
mRNA
_4392
12756
12757
12758
12759
12760
auxotrophy
YNB Glucose 75mM Methionine
-0.9
N.D.
+0.2
+0.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.9
N.D.
-0.4
-0.7
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
N.D.
-0.6
+0.8
-0.4
auxotrophy
Dropout Complete
-0.9
N.D.
+0.1
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.0
N.D.
+0.6
-0.5
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
N.D.
-0.5
+0.4
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
N.D.
-0.4
-0.8
+0.9
growth on ricinoleic acid
YNB Glucose
-0.5
N.D.
+0.3
-0.3
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
N.D.
+0.1
+0.1
-0.1
auxotrophy
YNB Glucose
-0.4
N.D.
+0.3
+0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
-0.0
-0.5
+0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
N.D.
+0.8
-0.6
+0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.4
N.D.
+0.4
+0.2
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.1
N.D.
+0.2
+0.4
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.9
N.D.
+0.8
-0.1
+1.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
N.D.
+0.3
-0.3
+1.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
+0.2
+0.0
+1.0
growth on oleic acid
YNB Glucose
+0.1
N.D.
+0.5
+0.1
+0.5
growth on oleic acid
YNB Oleic Acid
+0.4
N.D.
+0.7
+0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
N.D.
+1.1
+0.2
+0.6
growth on ypd
YPD
+0.0
N.D.
+0.8
+0.8
+0.3
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