Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12756 and 12757 are separated by 358 nucleotides12757 and 12758 are separated by 711 nucleotides12758 and 12759 are separated by 884 nucleotides12759 and 12760 overlap by 4 nucleotides mRNA_4388: 12756 - KOG2084 Predicted histone tail methylase containing SET domain, at 72,775 to 74,031 12756 mRNA_4389: 12757 - K10735 GINS4, SLD5 GINS complex subunit 4, at 74,390 to 75,580 12757 mRNA_4390: 12758 - K16261 YAT yeast amino acid transporter, at 76,292 to 78,680 12758 mRNA_4391: 12759 - Hypothetical Protein, at 79,565 to 80,188 12759 mRNA_4392: 12760 - KOG3069 Peroxisomal NUDIX hydrolase, at 80,185 to 81,389 12760
Group Condition mRNA_4388 mRNA_4389 mRNA_4390 mRNA_4391 mRNA_4392
12756 12757 12758 12759 12760
auxotrophy YNB Glucose 75mM Methionine -0.9 N.D. +0.2 +0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.9 N.D. -0.4 -0.7 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 N.D. -0.6 +0.8 -0.4
auxotrophy Dropout Complete -0.9 N.D. +0.1 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 N.D. +0.6 -0.5 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 N.D. -0.5 +0.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. -0.4 -0.8 +0.9
growth on ricinoleic acid YNB Glucose -0.5 N.D. +0.3 -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. +0.1 +0.1 -0.1
auxotrophy YNB Glucose -0.4 N.D. +0.3 +0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.0 -0.5 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 N.D. +0.8 -0.6 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.4 N.D. +0.4 +0.2 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. +0.2 +0.4 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 N.D. +0.8 -0.1 +1.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.3 -0.3 +1.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.2 +0.0 +1.0
growth on oleic acid YNB Glucose +0.1 N.D. +0.5 +0.1 +0.5
growth on oleic acid YNB Oleic Acid +0.4 N.D. +0.7 +0.3 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +1.1 +0.2 +0.6
growth on ypd YPD +0.0 N.D. +0.8 +0.8 +0.3
remove
mRNA_4388
plot
remove
mRNA_4389
plot
remove
mRNA_4390
remove
mRNA_4391
plot
remove
mRNA_4392
plot