Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12758 and 12759 are separated by 884 nucleotides12759 and 12760 overlap by 4 nucleotides12760 and 12761 are separated by 892 nucleotides12761 and 12762 are separated by 201 nucleotides mRNA_4390: 12758 - K16261 YAT yeast amino acid transporter, at 76,292 to 78,680 12758 mRNA_4391: 12759 - Hypothetical Protein, at 79,565 to 80,188 12759 mRNA_4392: 12760 - KOG3069 Peroxisomal NUDIX hydrolase, at 80,185 to 81,389 12760 mRNA_4393: 12761 - K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+), at 82,282 to 84,844 12761 mRNA_4394: 12762 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 85,046 to 87,560 12762
Group Condition mRNA_4390 mRNA_4391 mRNA_4392 mRNA_4393 mRNA_4394
12758 12759 12760 12761 12762
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.7 -0.7 +0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.8 -0.4 +0.2 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.8 +0.9 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 -0.5 +0.2 -0.7 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.0 -0.3 -0.3 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.4 -0.2 +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.5 +0.5 +0.3 -0.1
auxotrophy Dropout Complete +0.1 +0.2 -0.1 -0.1 +0.3
growth on ricinoleic acid YNB Glucose +0.3 -0.3 +0.1 +0.1 +0.2
growth on oleic acid YNB Oleic Acid +0.7 +0.3 -0.0 -0.5 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.1 +0.5 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.4 +0.0 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.0 +1.0 -0.4 -0.2
auxotrophy YNB Glucose +0.3 +0.1 -0.0 -0.1 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 -0.6 +0.4 +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.2 +0.3 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.3 +1.2 -0.1 +0.1
growth on oleic acid YNB Glucose +0.5 +0.1 +0.5 +0.1 +0.2
growth on ypd YPD +0.8 +0.8 +0.3 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 -0.1 +1.3 -0.3 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +1.1 +0.2 +0.6 +0.3 -0.1
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