Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12760 and 12761 are separated by 892 nucleotides12761 and 12762 are separated by 201 nucleotides12762 and 12763 are separated by 505 nucleotides12763 and 12764 are separated by 221 nucleotides mRNA_4392: 12760 - KOG3069 Peroxisomal NUDIX hydrolase, at 80,185 to 81,389 12760 mRNA_4393: 12761 - K00029 E1.1.1.40, maeB malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+), at 82,282 to 84,844 12761 mRNA_4394: 12762 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 85,046 to 87,560 12762 mRNA_4395: 12763 - HMMPfam-RTA1 like protein-PF04479, at 88,066 to 89,251 12763 mRNA_4396: 12764 - BLAST NAD(P)-dependent alcohol dehydrogenase [Mycena chloro..., at 89,473 to 89,864 12764
Group Condition mRNA_4392 mRNA_4393 mRNA_4394 mRNA_4395 mRNA_4396
12760 12761 12762 12763 12764
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.1 -0.2 -0.6 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.7 +0.3 -0.6 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.9 +0.2 -0.3 -1.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.2 -0.5 +0.4 N.D.
growth on oleic acid YNB Oleic Acid -0.0 -0.5 +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.0 -0.4 -0.2 -0.5 N.D.
growth on ypd YPD +0.3 +0.2 -0.3 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.1 +0.2 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.2 +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.3 -0.3 +0.3 -0.9 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.3 +0.4 +0.7 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.2 -0.1 +0.1 -0.7 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.5 -0.1 +0.5 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.5 +0.3 -0.1 +0.3 N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.1 +0.2 +0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.0 +0.0 +1.1 N.D.
auxotrophy Dropout Complete -0.1 -0.1 +0.3 +1.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.1 +0.1 +0.7 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 +0.3 -0.1 +0.8 N.D.
auxotrophy YNB Glucose -0.0 -0.1 +0.6 +1.3 N.D.
growth on oleic acid YNB Glucose +0.5 +0.1 +0.2 +1.3 N.D.
remove
mRNA_4392
plot
remove
mRNA_4393
plot
remove
mRNA_4394
remove
mRNA_4395
plot
remove
mRNA_4396
plot