Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12763 and 12764 are separated by 221 nucleotides12764 and 12765 are separated by 150 nucleotides12765 and 12766 are separated by 387 nucleotides12766 and 12767 are separated by 811 nucleotides mRNA_4395: 12763 - HMMPfam-RTA1 like protein-PF04479, at 88,066 to 89,251 12763 mRNA_4396: 12764 - BLAST NAD(P)-dependent alcohol dehydrogenase [Mycena chloro..., at 89,473 to 89,864 12764 mRNA_4397: 12765 - HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129, at 90,015 to 90,968 12765 mRNA_4398: 12766 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 91,356 to 92,891 12766 mRNA_4399: 12767 - HMMPfam-CFEM domain-PF05730, at 93,703 to 94,660 12767
Group Condition mRNA_4395 mRNA_4396 mRNA_4397 mRNA_4398 mRNA_4399
12763 12764 12765 12766 12767
facs on lipid accumulation Sorted High BODIPY Gate -1.2 N.D. N.D. +0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 N.D. N.D. +0.2 +0.0
growth on oleic acid YNB Oleic Acid +0.2 N.D. N.D. -0.4 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 N.D. N.D. +0.1 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 N.D. N.D. -0.2 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 N.D. N.D. +0.0 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 N.D. N.D. +0.5 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 N.D. N.D. +0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. N.D. +0.3 -0.1
growth on ricinoleic acid YNB Glucose +0.5 N.D. N.D. -0.3 +0.2
growth on oleic acid YNB Glucose +1.3 N.D. N.D. -0.7 -0.0
growth on ypd YPD -0.0 N.D. N.D. -0.1 +0.8
ypd buoyancy 40 hrs High Buoyancy +0.3 N.D. N.D. +0.4 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 N.D. N.D. -0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine +1.1 N.D. N.D. -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. N.D. +0.8 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.7 N.D. N.D. +0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 N.D. N.D. +0.0 +0.1
auxotrophy Dropout Complete +1.2 N.D. N.D. -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.5 N.D. N.D. +0.5 +0.3
auxotrophy YNB Glucose +1.3 N.D. N.D. +0.1 +0.0
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