Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12765 and 12766 are separated by 387 nucleotides12766 and 12767 are separated by 811 nucleotides12767 and 12768 are separated by 569 nucleotides12768 and 12769 are separated by 574 nucleotides mRNA_4397: 12765 - HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129, at 90,015 to 90,968 12765 mRNA_4398: 12766 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 91,356 to 92,891 12766 mRNA_4399: 12767 - HMMPfam-CFEM domain-PF05730, at 93,703 to 94,660 12767 mRNA_4400: 12768 - Hypothetical Protein, at 95,230 to 97,148 12768 mRNA_4401: 12769 - KOG3303 Predicted alpha-helical protein, potentially involved in replication/repair, at 97,723 to 98,507 12769
Group Condition mRNA_4397 mRNA_4398 mRNA_4399 mRNA_4400 mRNA_4401
12765 12766 12767 12768 12769
growth on oleic acid YNB Glucose N.D. -0.7 -0.0 -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 -0.4 -0.7 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.4 -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 +0.4 -0.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 +0.2 -0.2 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.3 +0.2 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.0 +0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 +0.0 -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 -0.3 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.4 -0.0 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.0 +0.3 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.1 +0.4 N.D.
auxotrophy Dropout Complete N.D. -0.3 +0.1 +0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 -0.1 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.5 -0.0 -0.1 N.D.
auxotrophy YNB Glucose N.D. +0.1 +0.0 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.5 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.5 +0.3 -0.3 N.D.
growth on ypd YPD N.D. -0.1 +0.8 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 +0.1 +0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.8 +0.3 -0.1 N.D.
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