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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12767 and 12768 are separated by 569 nucleotides
12768 and 12769 are separated by 574 nucleotides
12769 and 12770 are separated by 119 nucleotides
12770 and 12771 are separated by 249 nucleotides
mRNA_4399: 12767 - HMMPfam-CFEM domain-PF05730, at 93,703 to 94,660
12767
mRNA_4400: 12768 - Hypothetical Protein, at 95,230 to 97,148
12768
mRNA_4401: 12769 - KOG3303 Predicted alpha-helical protein, potentially involved in replication/repair, at 97,723 to 98,507
12769
mRNA_4402: 12770 - Hypothetical Protein, at 98,627 to 98,893
12770
mRNA_4403: 12771 - Hypothetical Protein, at 99,143 to 102,687
12771
Group
Condition
mRNA
_4399
mRNA
_4400
mRNA
_4401
mRNA
_4402
mRNA
_4403
12767
12768
12769
12770
12771
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.1
N.D.
-0.7
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.7
N.D.
+0.0
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.4
N.D.
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
-0.6
N.D.
-0.4
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.1
N.D.
-0.4
+0.2
growth on oleic acid
YNB Glucose
-0.0
-0.3
N.D.
-0.3
+0.3
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
N.D.
-0.4
+0.3
growth on ricinoleic acid
YNB Glucose
+0.2
-0.1
N.D.
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.2
N.D.
+0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.3
N.D.
-0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.2
N.D.
-0.3
+0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.2
N.D.
-0.4
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
+0.0
N.D.
-0.4
+0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.1
N.D.
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
-0.3
N.D.
-0.0
+0.1
auxotrophy
Dropout Complete
+0.1
+0.4
N.D.
-0.5
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.4
N.D.
-0.2
+0.2
auxotrophy
YNB Glucose
+0.0
+0.3
N.D.
-0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.3
N.D.
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
-0.1
N.D.
+0.0
+0.0
growth on ypd
YPD
+0.8
-0.1
N.D.
-0.1
-0.0
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