Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12768 and 12769 are separated by 574 nucleotides12769 and 12770 are separated by 119 nucleotides12770 and 12771 are separated by 249 nucleotides12771 and 12772 are separated by 365 nucleotides mRNA_4400: 12768 - Hypothetical Protein, at 95,230 to 97,148 12768 mRNA_4401: 12769 - KOG3303 Predicted alpha-helical protein, potentially involved in replication/repair, at 97,723 to 98,507 12769 mRNA_4402: 12770 - Hypothetical Protein, at 98,627 to 98,893 12770 mRNA_4403: 12771 - Hypothetical Protein, at 99,143 to 102,687 12771 mRNA_4404: 12772 - HMMPfam-Fatty acid hydroxylase superfamily-PF04116, at 103,053 to 104,397 12772
Group Condition mRNA_4400 mRNA_4401 mRNA_4402 mRNA_4403 mRNA_4404
12768 12769 12770 12771 12772
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. -0.4 +0.2 -1.7
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. -0.4 +0.5 -1.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 N.D. +0.0 +0.3 -1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 N.D. -0.4 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 N.D. -0.7 -0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -0.3 +0.1 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. -0.3 +0.4 -0.4
growth on ricinoleic acid YNB Glucose -0.1 N.D. -0.3 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.4 N.D. -0.2 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. +0.0 +0.0 -0.4
growth on ypd YPD -0.1 N.D. -0.1 -0.0 -0.2
growth on oleic acid YNB Glucose -0.3 N.D. -0.3 +0.3 -0.1
growth on oleic acid YNB Oleic Acid +0.1 N.D. -0.4 +0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. -0.4 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.3 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -0.0 +0.1 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.3 N.D. -0.1 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. -0.2 +0.2 -0.3
auxotrophy Dropout Complete +0.4 N.D. -0.5 +0.1 +0.1
auxotrophy YNB Glucose +0.3 N.D. -0.2 +0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. -0.3 +0.2 -0.0
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