Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12769 and 12770 are separated by 119 nucleotides12770 and 12771 are separated by 249 nucleotides12771 and 12772 are separated by 365 nucleotides12772 and 12773 are separated by 700 nucleotides mRNA_4401: 12769 - KOG3303 Predicted alpha-helical protein, potentially involved in replication/repair, at 97,723 to 98,507 12769 mRNA_4402: 12770 - Hypothetical Protein, at 98,627 to 98,893 12770 mRNA_4403: 12771 - Hypothetical Protein, at 99,143 to 102,687 12771 mRNA_4404: 12772 - HMMPfam-Fatty acid hydroxylase superfamily-PF04116, at 103,053 to 104,397 12772 mRNA_4405: 12773 - K05925 METTL3_14 mRNA (2'-O-methyladenosine-N6-)-methyltransferase, at 105,098 to 106,781 12773
Group Condition mRNA_4401 mRNA_4402 mRNA_4403 mRNA_4404 mRNA_4405
12769 12770 12771 12772 12773
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.4 +0.2 -1.7 -0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.4 +0.5 -1.7 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.7 -0.1 +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 +0.1 -0.5 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 +0.0 -0.4 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 +0.0 +0.1 -0.3
growth on oleic acid YNB Oleic Acid N.D. -0.4 +0.3 -0.3 +0.1
growth on ypd YPD N.D. -0.1 -0.0 -0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 +0.2 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 -0.1 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.0 +0.1 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.4 +0.1 -0.1 +0.5
growth on ricinoleic acid YNB Glucose N.D. -0.3 +0.1 -0.2 +0.6
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 +0.4 -0.4 +0.5
growth on oleic acid YNB Glucose N.D. -0.3 +0.3 -0.1 +0.3
auxotrophy Dropout Complete N.D. -0.5 +0.1 +0.1 +0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.1 +0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 +0.3 -1.0 +1.0
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 +0.2 -0.0 +0.5
auxotrophy YNB Glucose N.D. -0.2 +0.2 -0.1 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 +0.4 -0.1 +1.0
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