Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12772 and 12773 are separated by 700 nucleotides12773 and 12774 are separated by 73 nucleotides12774 and 12775 are separated by 150 nucleotides12775 and 12776 are separated by 384 nucleotides mRNA_4404: 12772 - HMMPfam-Fatty acid hydroxylase superfamily-PF04116, at 103,053 to 104,397 12772 mRNA_4405: 12773 - K05925 METTL3_14 mRNA (2'-O-methyladenosine-N6-)-methyltransferase, at 105,098 to 106,781 12773 mRNA_4406: 12774 - KOG2100 Dipeptidyl aminopeptidase, at 106,855 to 109,155 12774 mRNA_4407: 12775 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 109,306 to 110,822 12775 mRNA_4408: 12776 - HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 111,207 to 112,706 12776
Group Condition mRNA_4404 mRNA_4405 mRNA_4406 mRNA_4407 mRNA_4408
12772 12773 12774 12775 12776
facs on lipid accumulation Sorted High BODIPY Gate -1.7 -0.0 +0.0 -0.2 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.0 +0.1 -0.3 -0.7
growth on oleic acid YNB Oleic Acid -0.3 +0.1 -0.2 +0.2 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.0 -0.1 -0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.1 -0.2 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.1 +0.0 -0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.3 +0.0 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -1.7 +0.3 +0.7 -0.1 +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.0 +0.1 -0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -1.0 +1.0 -0.1 -0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.3 +0.4 -0.0 -0.6
growth on ricinoleic acid YNB Glucose -0.2 +0.6 +0.1 -0.1 -0.5
growth on oleic acid YNB Glucose -0.1 +0.3 -0.1 +0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.5 -0.1 -0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.3 +0.3 +0.1 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.5 -0.0 +0.4 -0.1
growth on ypd YPD -0.2 +0.2 +0.0 -0.1 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +1.0 +0.1 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.5 +0.4 -0.0 +0.0
auxotrophy YNB Glucose -0.1 +0.6 +0.4 -0.1 +0.6
auxotrophy Dropout Complete +0.1 +0.5 +0.4 -0.0 +0.5
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