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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12772 and 12773 are separated by 700 nucleotides
12773 and 12774 are separated by 73 nucleotides
12774 and 12775 are separated by 150 nucleotides
12775 and 12776 are separated by 384 nucleotides
mRNA_4404: 12772 - HMMPfam-Fatty acid hydroxylase superfamily-PF04116, at 103,053 to 104,397
12772
mRNA_4405: 12773 - K05925 METTL3_14 mRNA (2'-O-methyladenosine-N6-)-methyltransferase, at 105,098 to 106,781
12773
mRNA_4406: 12774 - KOG2100 Dipeptidyl aminopeptidase, at 106,855 to 109,155
12774
mRNA_4407: 12775 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 109,306 to 110,822
12775
mRNA_4408: 12776 - HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 111,207 to 112,706
12776
Group
Condition
mRNA
_4404
mRNA
_4405
mRNA
_4406
mRNA
_4407
mRNA
_4408
12772
12773
12774
12775
12776
facs on lipid accumulation
Sorted High BODIPY Gate
-1.7
-0.0
+0.0
-0.2
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
+0.0
+0.1
-0.3
-0.7
growth on oleic acid
YNB Oleic Acid
-0.3
+0.1
-0.2
+0.2
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.0
-0.1
-0.3
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
+0.1
-0.2
-0.5
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.1
+0.0
-0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.3
+0.0
-0.2
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.7
+0.3
+0.7
-0.1
+0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.5
+0.0
+0.1
-0.0
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.0
+1.0
-0.1
-0.3
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.3
+0.4
-0.0
-0.6
growth on ricinoleic acid
YNB Glucose
-0.2
+0.6
+0.1
-0.1
-0.5
growth on oleic acid
YNB Glucose
-0.1
+0.3
-0.1
+0.1
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.5
-0.1
-0.2
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.3
+0.3
+0.1
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
+0.5
-0.0
+0.4
-0.1
growth on ypd
YPD
-0.2
+0.2
+0.0
-0.1
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+1.0
+0.1
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.5
+0.4
-0.0
+0.0
auxotrophy
YNB Glucose
-0.1
+0.6
+0.4
-0.1
+0.6
auxotrophy
Dropout Complete
+0.1
+0.5
+0.4
-0.0
+0.5
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