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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12773 and 12774 are separated by 73 nucleotides
12774 and 12775 are separated by 150 nucleotides
12775 and 12776 are separated by 384 nucleotides
12776 and 12777 are separated by 421 nucleotides
mRNA_4405: 12773 - K05925 METTL3_14 mRNA (2'-O-methyladenosine-N6-)-methyltransferase, at 105,098 to 106,781
12773
mRNA_4406: 12774 - KOG2100 Dipeptidyl aminopeptidase, at 106,855 to 109,155
12774
mRNA_4407: 12775 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 109,306 to 110,822
12775
mRNA_4408: 12776 - HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 111,207 to 112,706
12776
mRNA_4409: 12777 - KOG1218 Proteins containing Ca2+-binding EGF-like domains, at 113,128 to 114,818
12777
Group
Condition
mRNA
_4405
mRNA
_4406
mRNA
_4407
mRNA
_4408
mRNA
_4409
12773
12774
12775
12776
12777
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.0
-0.2
-0.5
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.3
+0.0
-0.2
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
+0.1
-0.3
-0.7
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
-0.1
-0.3
-0.2
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
-0.2
+0.2
-0.6
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.2
-0.5
-0.1
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.0
-0.1
+0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.1
-0.0
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
-0.1
-0.2
+0.0
-0.2
growth on ricinoleic acid
YNB Glucose
+0.6
+0.1
-0.1
-0.5
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.4
-0.0
-0.6
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.3
+0.1
-0.6
-0.0
growth on oleic acid
YNB Glucose
+0.3
-0.1
+0.1
-0.4
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+1.0
-0.1
-0.3
+0.0
-0.3
growth on ypd
YPD
+0.2
+0.0
-0.1
+0.6
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.5
-0.0
+0.4
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.5
+0.4
-0.0
+0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.0
+0.1
-0.0
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
+0.7
-0.1
+0.4
+0.2
auxotrophy
YNB Glucose
+0.6
+0.4
-0.1
+0.6
+0.1
auxotrophy
Dropout Complete
+0.5
+0.4
-0.0
+0.5
+0.3
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