Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12780 and 12781 are separated by 132 nucleotides12781 and 12782 are separated by 725 nucleotides12782 and 12783 are separated by 852 nucleotides12783 and 12784 are separated by 350 nucleotides mRNA_4412: 12780 - SUPERFAMILY--SSF52047, at 120,442 to 126,387 12780 mRNA_4413: 12781 - KOG0252 Inorganic phosphate transporter, at 126,520 to 129,077 12781 mRNA_4414: 12782 - BLAST DiGeorge syndrome critical region 6 (DGCR6) protein [..., at 129,803 to 130,566 12782 mRNA_4415: 12783 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 131,419 to 134,157 12783 mRNA_4416: 12784 - K00002 AKR1A1, adh alcohol dehydrogenase (NADP+), at 134,508 to 136,011 12784
Group Condition mRNA_4412 mRNA_4413 mRNA_4414 mRNA_4415 mRNA_4416
12780 12781 12782 12783 12784
growth on ricinoleic acid YNB Glucose +0.1 -0.2 -0.3 -0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.1 -0.1 -0.2 -0.5
growth on ypd YPD +0.1 -0.2 -0.6 +0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.1 -0.3 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.1 +0.1 -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.0 -0.3 -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.1 +0.3 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 -0.3 +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.2 +0.2 -0.0 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.1 +0.5 -0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.0 +0.6 -0.2 -0.2
auxotrophy YNB Glucose +0.1 +0.1 +0.3 +0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.3 +0.4 -0.2 -0.0
auxotrophy Dropout Complete +0.0 -0.0 +0.7 -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.3 +0.4 +0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.0 +0.1 +0.1 -0.0
growth on oleic acid YNB Oleic Acid +0.1 +0.3 +0.0 -0.1 +0.1
growth on oleic acid YNB Glucose +0.1 +0.3 -0.2 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 +0.4 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 +0.8 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.3 +0.6 +0.1 +0.2
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