Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 12781 and 12782 are separated by 725 nucleotides12782 and 12783 are separated by 852 nucleotides12783 and 12784 are separated by 350 nucleotides12784 and 12785 are separated by 425 nucleotides mRNA_4413: 12781 - KOG0252 Inorganic phosphate transporter, at 126,520 to 129,077 12781 mRNA_4414: 12782 - BLAST DiGeorge syndrome critical region 6 (DGCR6) protein [..., at 129,803 to 130,566 12782 mRNA_4415: 12783 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 131,419 to 134,157 12783 mRNA_4416: 12784 - K00002 AKR1A1, adh alcohol dehydrogenase (NADP+), at 134,508 to 136,011 12784 mRNA_4417: 12785 - Hypothetical Protein, at 136,437 to 137,903 12785
Group Condition mRNA_4413 mRNA_4414 mRNA_4415 mRNA_4416 mRNA_4417
12781 12782 12783 12784 12785
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 -0.2 -0.5 -1.0
growth on ricinoleic acid YNB Glucose -0.2 -0.3 -0.2 -0.4 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.1 -0.2 -0.1 -1.0
growth on ypd YPD -0.2 -0.6 +0.0 -0.0 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.3 -0.1 -0.0 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 -0.0 -0.4 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.3 -0.1 -0.3 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 -0.1 -0.2 +0.3
auxotrophy YNB Glucose +0.1 +0.3 +0.1 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.4 +0.0 +0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.5 -0.1 -0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.3 +0.1 -0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.6 -0.2 -0.2 -0.2
growth on oleic acid YNB Glucose +0.3 -0.2 +0.1 +0.2 -0.3
auxotrophy Dropout Complete -0.0 +0.7 -0.0 -0.4 -0.1
growth on oleic acid YNB Oleic Acid +0.3 +0.0 -0.1 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.4 +0.3 +0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 +0.4 -0.2 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 +0.1 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.6 +0.1 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.8 +0.0 +0.1 -0.1
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