Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12782 and 12783 are separated by 852 nucleotides12783 and 12784 are separated by 350 nucleotides12784 and 12785 are separated by 425 nucleotides12785 and 12786 are separated by 171 nucleotides mRNA_4414: 12782 - BLAST DiGeorge syndrome critical region 6 (DGCR6) protein [..., at 129,803 to 130,566 12782 mRNA_4415: 12783 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 131,419 to 134,157 12783 mRNA_4416: 12784 - K00002 AKR1A1, adh alcohol dehydrogenase (NADP+), at 134,508 to 136,011 12784 mRNA_4417: 12785 - Hypothetical Protein, at 136,437 to 137,903 12785 mRNA_4418: 12786 - KOG3683 Uncharacterized conserved protein, at 138,075 to 139,542 12786
Group Condition mRNA_4414 mRNA_4415 mRNA_4416 mRNA_4417 mRNA_4418
12782 12783 12784 12785 12786
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 -0.5 -1.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.1 -0.0 -0.3 -1.3
growth on ricinoleic acid YNB Glucose -0.3 -0.2 -0.4 -0.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.2 -0.1 -1.0 +0.1
growth on ypd YPD -0.6 +0.0 -0.0 -0.0 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.0 -0.4 -0.4 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 -0.2 +0.3 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.2 -0.0 -0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.1 -0.3 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.0 +0.1 -0.4 -0.5
auxotrophy YNB Glucose +0.3 +0.1 -0.5 -0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.5 -0.1 -0.3 -0.2 +0.1
growth on oleic acid YNB Glucose -0.2 +0.1 +0.2 -0.3 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.1 -0.0 +0.2 +0.2
auxotrophy Dropout Complete +0.7 -0.0 -0.4 -0.1 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.6 -0.2 -0.2 -0.2 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 -0.0 +0.1 +0.0
growth on oleic acid YNB Oleic Acid +0.0 -0.1 +0.1 -0.1 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.3 +0.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.8 +0.0 +0.1 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.1 +0.2 -0.1 +0.4
remove
mRNA_4414
plot
remove
mRNA_4415
plot
remove
mRNA_4416
remove
mRNA_4417
plot
remove
mRNA_4418
plot