Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12783 and 12784 are separated by 350 nucleotides12784 and 12785 are separated by 425 nucleotides12785 and 12786 are separated by 171 nucleotides12786 and 12787 are separated by 322 nucleotides mRNA_4415: 12783 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 131,419 to 134,157 12783 mRNA_4416: 12784 - K00002 AKR1A1, adh alcohol dehydrogenase (NADP+), at 134,508 to 136,011 12784 mRNA_4417: 12785 - Hypothetical Protein, at 136,437 to 137,903 12785 mRNA_4418: 12786 - KOG3683 Uncharacterized conserved protein, at 138,075 to 139,542 12786 mRNA_4419: 12787 - K11121 SIR2 NAD-dependent histone deacetylase SIR2, at 139,865 to 142,182 12787
Group Condition mRNA_4415 mRNA_4416 mRNA_4417 mRNA_4418 mRNA_4419
12783 12784 12785 12786 12787
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.0 -0.1 -0.4 -1.8
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.4 -0.4 +0.1 -1.7
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.3 -0.3 -0.0 -1.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.0 -0.3 -1.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.5 -1.0 -0.3 +0.8
auxotrophy Dropout Complete -0.0 -0.4 -0.1 +0.0 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 -0.2 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.1 -0.4 -0.5 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.2 -0.2 +0.3 -0.2
auxotrophy YNB Glucose +0.1 -0.5 -0.2 +0.2 +0.0
growth on ricinoleic acid YNB Glucose -0.2 -0.4 -0.4 -0.2 +0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 -1.0 +0.1 +1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.1 -0.1 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.1 -0.2 -0.1 +0.1
growth on ypd YPD +0.0 -0.0 -0.0 -0.4 +0.6
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.0 +0.1 +0.0 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 +0.3 -0.3 +0.7
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 +0.2 +0.2 +0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.1 -0.1 +0.6 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 -0.1 +0.4 +0.1
growth on oleic acid YNB Glucose +0.1 +0.2 -0.3 +0.3 +0.4
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