Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12791 and 12792 are separated by 114 nucleotides12792 and 12793 are separated by 38 nucleotides12793 and 12794 are separated by 341 nucleotides12794 and 12795 are separated by 996 nucleotides mRNA_4423: 12791 - K09528 DNAJC8 DnaJ homolog subfamily C member 8, at 150,001 to 151,135 12791 mRNA_4424: 12792 - KOG3860 Acyltransferase required for palmitoylation of Hedgehog (Hh) family of secreted signaling proteins, at 151,250 to 153,858 12792 mRNA_4425: 12793 - KOG3844 Predicted component of NuA3 histone acetyltransferase complex, at 153,897 to 156,025 12793 mRNA_4426: 12794 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 156,367 to 159,071 12794 mRNA_4427: 12795 - K11539 CBR4 carbonyl reductase 4, at 160,068 to 161,346 12795
Group Condition mRNA_4423 mRNA_4424 mRNA_4425 mRNA_4426 mRNA_4427
12791 12792 12793 12794 12795
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.5 -0.3 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.5 -0.3 -0.2
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.3 -0.4 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.9 -0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.1 -0.1 -0.5
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.1 -0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.1 +0.0 -0.2
auxotrophy Dropout Complete N.D. N.D. -0.2 +0.1 -0.2
auxotrophy YNB Glucose N.D. N.D. -0.1 +0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.1 -0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.2 -0.1 +0.1
growth on ypd YPD N.D. N.D. -0.1 +0.2 -0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.0 +0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.1 +0.1 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.1 -0.2 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.0 -0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.1 -0.1 +0.3
growth on oleic acid YNB Glucose N.D. N.D. -0.1 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.2 -0.1 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.4 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.3 +0.1 +0.4
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