Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12792 and 12793 are separated by 38 nucleotides12793 and 12794 are separated by 341 nucleotides12794 and 12795 are separated by 996 nucleotides12795 and 12796 are separated by 380 nucleotides mRNA_4424: 12792 - KOG3860 Acyltransferase required for palmitoylation of Hedgehog (Hh) family of secreted signaling proteins, at 151,250 to 153,858 12792 mRNA_4425: 12793 - KOG3844 Predicted component of NuA3 histone acetyltransferase complex, at 153,897 to 156,025 12793 mRNA_4426: 12794 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 156,367 to 159,071 12794 mRNA_4427: 12795 - K11539 CBR4 carbonyl reductase 4, at 160,068 to 161,346 12795 mRNA_4428: 12796 - Hypothetical Protein, at 161,727 to 164,031 12796
Group Condition mRNA_4424 mRNA_4425 mRNA_4426 mRNA_4427 mRNA_4428
12792 12793 12794 12795 12796
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.9 -0.1 +0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.5 -0.3 -0.4 +0.1
growth on ricinoleic acid YNB Glucose N.D. -0.3 -0.4 -0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.5 -0.3 -0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.1 -0.5 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 -0.1 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 +0.0 -0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.2 +0.0 -0.2
auxotrophy YNB Glucose N.D. -0.1 +0.1 -0.3 -0.0
auxotrophy Dropout Complete N.D. -0.2 +0.1 -0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 -0.1 +0.1 +0.1
growth on ypd YPD N.D. -0.1 +0.2 -0.2 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.1 -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 -0.2 +0.5 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.0 -0.1 +0.3 -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 -0.1 +0.3 -0.1
growth on oleic acid YNB Oleic Acid N.D. +0.0 +0.2 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.4 +0.1 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 -0.1 +0.5 +0.2
growth on oleic acid YNB Glucose N.D. -0.1 +0.4 +0.2 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.3 +0.1 +0.4 +0.3
remove
mRNA_4424
plot		 remove
mRNA_4425
plot		 remove
mRNA_4426		 remove
mRNA_4427
plot		 remove
mRNA_4428
plot