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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12793 and 12794 are separated by 341 nucleotides
12794 and 12795 are separated by 996 nucleotides
12795 and 12796 are separated by 380 nucleotides
12796 and 12797 are separated by 517 nucleotides
mRNA_4425: 12793 - KOG3844 Predicted component of NuA3 histone acetyltransferase complex, at 153,897 to 156,025
12793
mRNA_4426: 12794 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 156,367 to 159,071
12794
mRNA_4427: 12795 - K11539 CBR4 carbonyl reductase 4, at 160,068 to 161,346
12795
mRNA_4428: 12796 - Hypothetical Protein, at 161,727 to 164,031
12796
mRNA_4429: 12797 - HMMPfam-GDP-fucose protein O-fucosyltransferase-PF10250, at 164,549 to 166,627
12797
Group
Condition
mRNA
_4425
mRNA
_4426
mRNA
_4427
mRNA
_4428
mRNA
_4429
12793
12794
12795
12796
12797
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
-0.1
+0.0
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.3
-0.4
-0.4
-0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.3
-0.4
+0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.3
-0.2
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.1
-0.5
-0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
+0.0
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.0
-0.2
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
-0.2
-0.1
+0.3
auxotrophy
YNB Glucose
-0.1
+0.1
-0.3
-0.0
+0.1
auxotrophy
Dropout Complete
-0.2
+0.1
-0.2
+0.1
+0.0
growth on ypd
YPD
-0.1
+0.2
-0.2
+0.0
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.1
+0.1
+0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.2
+0.5
-0.0
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
-0.0
-0.1
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.1
+0.3
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.1
+0.3
-0.0
+0.2
growth on oleic acid
YNB Oleic Acid
+0.0
+0.2
-0.2
+0.4
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
+0.1
+0.1
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.1
+0.5
+0.2
+0.3
growth on oleic acid
YNB Glucose
-0.1
+0.4
+0.2
+0.5
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.1
+0.4
+0.3
+0.4
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