Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12795 and 12796 are separated by 380 nucleotides12796 and 12797 are separated by 517 nucleotides12797 and 12798 are separated by 389 nucleotides12798 and 12799 are separated by 247 nucleotides mRNA_4427: 12795 - K11539 CBR4 carbonyl reductase 4, at 160,068 to 161,346 12795 mRNA_4428: 12796 - Hypothetical Protein, at 161,727 to 164,031 12796 mRNA_4429: 12797 - HMMPfam-GDP-fucose protein O-fucosyltransferase-PF10250, at 164,549 to 166,627 12797 mRNA_4430: 12798 - KOG0322 G-protein beta subunit-like protein GNB1L, contains WD repeats, at 167,017 to 168,895 12798 mRNA_4431: 12799 - Hypothetical Protein, at 169,143 to 170,784 12799
Group Condition mRNA_4427 mRNA_4428 mRNA_4429 mRNA_4430 mRNA_4431
12795 12796 12797 12798 12799
growth on ricinoleic acid YNB Glucose -0.4 -0.1 -0.0 N.D. -0.7
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.2 +0.1 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.2 -0.1 N.D. -0.4
growth on ypd YPD -0.2 +0.0 -0.0 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.1 +0.1 N.D. -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.2 -0.0 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.1 +0.1 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 +0.2 N.D. -0.1
auxotrophy YNB Glucose -0.3 -0.0 +0.1 N.D. +0.2
growth on oleic acid YNB Oleic Acid -0.2 +0.4 +0.1 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 +0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.0 +0.2 N.D. -0.3
auxotrophy Dropout Complete -0.2 +0.1 +0.0 N.D. +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.0 +0.2 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 +0.3 N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.0 +0.1 N.D. +0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.1 +0.1 N.D. +0.2
growth on oleic acid YNB Glucose +0.2 +0.5 +0.1 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.0 +0.0 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.2 +0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.3 +0.4 N.D. -0.1
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