Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12799 and 12800 are separated by 1294 nucleotides
12800 and 12801 are separated by 422 nucleotides
12801 and 12802 are separated by 665 nucleotides
12802 and 12803 are separated by 328 nucleotides
mRNA_4431: 12799 - Hypothetical Protein, at 169,143 to 170,784
12799
mRNA_4432: 12800 - Hypothetical Protein, at 172,079 to 172,706
12800
mRNA_4433: 12801 - Hypothetical Protein, at 173,129 to 173,293
12801
mRNA_4434: 12802 - Hypothetical Protein, at 173,959 to 175,087
12802
mRNA_4435: 12803 - KOG0154 RNA-binding protein RBM5 and related proteins, contain G-patch and RRM domains, at 175,416 to 177,921
12803
Group
Condition
mRNA
_4431
mRNA
_4432
mRNA
_4433
mRNA
_4434
mRNA
_4435
12799
12800
12801
12802
12803
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.2
N.D.
-0.4
-0.3
growth on ricinoleic acid
YNB Glucose
-0.7
+0.1
N.D.
-0.2
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.1
N.D.
-0.3
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.0
N.D.
-0.0
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
N.D.
-0.1
-0.2
growth on ypd
YPD
-0.3
-0.1
N.D.
+0.0
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-1.0
N.D.
+0.3
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.1
N.D.
-0.5
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.0
N.D.
+0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.0
N.D.
+0.1
+0.0
auxotrophy
Dropout Complete
+0.3
+0.1
N.D.
-0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.6
-0.1
N.D.
-0.4
-0.0
growth on oleic acid
YNB Oleic Acid
-0.2
+0.6
N.D.
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.1
N.D.
-0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.2
N.D.
+0.2
+0.3
growth on oleic acid
YNB Glucose
-0.2
+0.5
N.D.
-0.0
-0.2
auxotrophy
YNB Glucose
+0.2
+0.0
N.D.
-0.2
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.0
N.D.
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.2
N.D.
+0.2
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.1
N.D.
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
+0.4
N.D.
+0.1
+0.0
remove
mRNA_4431
plot
remove
mRNA_4432
plot
remove
mRNA_4433
remove
mRNA_4434
plot
remove
mRNA_4435
plot