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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12800 and 12801 are separated by 422 nucleotides
12801 and 12802 are separated by 665 nucleotides
12802 and 12803 are separated by 328 nucleotides
12803 and 12804 are separated by 384 nucleotides
mRNA_4432: 12800 - Hypothetical Protein, at 172,079 to 172,706
12800
mRNA_4433: 12801 - Hypothetical Protein, at 173,129 to 173,293
12801
mRNA_4434: 12802 - Hypothetical Protein, at 173,959 to 175,087
12802
mRNA_4435: 12803 - KOG0154 RNA-binding protein RBM5 and related proteins, contain G-patch and RRM domains, at 175,416 to 177,921
12803
mRNA_4436: 12804 - Hypothetical Protein, at 178,306 to 178,939
12804
Group
Condition
mRNA
_4432
mRNA
_4433
mRNA
_4434
mRNA
_4435
mRNA
_4436
12800
12801
12802
12803
12804
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
N.D.
-0.4
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
N.D.
-0.4
-0.0
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
N.D.
+0.3
+0.2
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
N.D.
-0.5
-0.0
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
N.D.
-0.3
+0.0
+0.2
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
-0.2
-0.5
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
-0.1
-0.2
+0.0
growth on oleic acid
YNB Glucose
+0.5
N.D.
-0.0
-0.2
-0.4
auxotrophy
YNB Glucose
+0.0
N.D.
-0.2
+0.2
+0.1
growth on oleic acid
YNB Oleic Acid
+0.6
N.D.
-0.0
-0.2
-0.3
growth on ypd
YPD
-0.1
N.D.
+0.0
+0.0
+0.3
ypd buoyancy
40 hrs High Buoyancy
+0.0
N.D.
+0.1
+0.0
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
N.D.
-0.0
+0.1
+0.1
auxotrophy
Dropout Complete
+0.1
N.D.
-0.3
-0.1
+0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
N.D.
-0.0
-0.6
+0.8
ypd buoyancy
40 hrs Median Buoyancy
+0.0
N.D.
+0.2
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
N.D.
+0.2
+0.0
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
N.D.
+0.1
+0.0
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
N.D.
+0.1
+0.2
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
N.D.
+0.2
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
N.D.
+0.3
+0.2
+0.3
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