Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12805 and 12806 are separated by 523 nucleotides12806 and 12807 are separated by 193 nucleotides12807 and 12808 are separated by 283 nucleotides12808 and 12809 are separated by 488 nucleotides mRNA_4437: 12805 - KOG4629 Predicted mechanosensitive ion channel, at 179,176 to 181,994 12805 mRNA_4438: 12806 - Hypothetical Protein, at 182,518 to 183,149 12806 mRNA_4439: 12807 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 183,343 to 183,707 12807 mRNA_4440: 12808 - KOG2439 Nuclear architecture related protein, at 183,991 to 186,593 12808 mRNA_4441: 12809 - SUPERFAMILY--SSF52047, at 187,082 to 188,392 12809
Group Condition mRNA_4437 mRNA_4438 mRNA_4439 mRNA_4440 mRNA_4441
12805 12806 12807 12808 12809
auxotrophy YNB Glucose 75mM Methionine -0.9 -0.1 -0.7 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.8 -0.1 N.D. -0.0
auxotrophy YNB Glucose -0.7 +0.0 -0.8 N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine -1.1 -0.1 -0.3 N.D. +0.4
growth on oleic acid YNB Glucose -0.9 -0.0 +0.1 N.D. -0.3
growth on ricinoleic acid YNB Glucose -0.6 -0.1 -0.3 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.4 -1.1 N.D. +0.2
auxotrophy Dropout Complete -0.7 -0.1 +0.0 N.D. -0.0
growth on ypd YPD +0.1 -0.3 -0.5 N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.4 -0.8 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.3 -0.2 N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 -0.1 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.2 -0.2 N.D. -0.0
growth on oleic acid YNB Oleic Acid -0.1 +0.1 -0.2 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 +0.0 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 +0.3 N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.0 +0.7 N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.8 -0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.5 -0.1 N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.4 +0.3 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.3 +0.6 N.D. +0.3
remove
mRNA_4437
plot
remove
mRNA_4438
plot
remove
mRNA_4439
remove
mRNA_4440
plot
remove
mRNA_4441
plot