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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12806 and 12807 are separated by 193 nucleotides
12807 and 12808 are separated by 283 nucleotides
12808 and 12809 are separated by 488 nucleotides
12809 and 12810 are separated by 183 nucleotides
mRNA_4438: 12806 - Hypothetical Protein, at 182,518 to 183,149
12806
mRNA_4439: 12807 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 183,343 to 183,707
12807
mRNA_4440: 12808 - KOG2439 Nuclear architecture related protein, at 183,991 to 186,593
12808
mRNA_4441: 12809 - SUPERFAMILY--SSF52047, at 187,082 to 188,392
12809
mRNA_4442: 12810 - SUPERFAMILY--SSF52047, at 188,576 to 190,157
12810
Group
Condition
mRNA
_4438
mRNA
_4439
mRNA
_4440
mRNA
_4441
mRNA
_4442
12806
12807
12808
12809
12810
growth on ypd
YPD
-0.3
-0.5
N.D.
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
-0.1
N.D.
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.7
N.D.
+0.1
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-1.1
N.D.
+0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
-0.8
N.D.
-0.1
-0.0
auxotrophy
YNB Glucose
+0.0
-0.8
N.D.
+0.0
+0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
N.D.
-0.1
-0.0
growth on oleic acid
YNB Glucose
-0.0
+0.1
N.D.
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
N.D.
+0.4
+0.0
auxotrophy
Dropout Complete
-0.1
+0.0
N.D.
-0.0
+0.2
growth on oleic acid
YNB Oleic Acid
+0.1
-0.2
N.D.
+0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.2
N.D.
-0.0
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.1
N.D.
-0.1
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.2
N.D.
-0.4
+0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
-0.1
N.D.
+0.3
-0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
N.D.
+0.1
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.3
N.D.
-0.3
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
+0.3
N.D.
+0.4
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.8
-0.1
N.D.
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
+0.6
N.D.
+0.3
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.7
N.D.
+0.0
+0.3
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