Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12809 and 12810 are separated by 183 nucleotides12810 and 12811 are separated by 625 nucleotides12811 and 12812 are separated by 597 nucleotides12812 and 12813 are separated by 126 nucleotides mRNA_4441: 12809 - SUPERFAMILY--SSF52047, at 187,082 to 188,392 12809 mRNA_4442: 12810 - SUPERFAMILY--SSF52047, at 188,576 to 190,157 12810 mRNA_4443: 12811 - SUPERFAMILY--SSF52047, at 190,783 to 192,210 12811 mRNA_4444: 12812 - K14327 UPF2, RENT2 regulator of nonsense transcripts 2, at 192,808 to 197,198 12812 mRNA_4445: 12813 - K16342 PLA2G4, CPLA2 cytosolic phospholipase A2, at 197,325 to 199,939 12813
Group Condition mRNA_4441 mRNA_4442 mRNA_4443 mRNA_4444 mRNA_4445
12809 12810 12811 12812 12813
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.1 -1.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.4 -0.4 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.5 -0.3 N.D. +0.0
growth on ypd YPD -0.1 -0.1 -0.3 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.2 -0.3 N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 -0.4 -0.0 N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.0 +0.0 N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.1 -0.0 +0.1 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.3 +0.2 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.2 +0.2 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.3 -0.1 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.0 N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.2 +0.3 N.D. -0.1
growth on oleic acid YNB Glucose -0.3 +0.1 +0.2 N.D. +0.2
auxotrophy Dropout Complete -0.0 +0.2 +0.2 N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.0 +0.1 N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.5 +0.4 N.D. -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.3 +0.2 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.0 +0.0 N.D. +0.2
auxotrophy YNB Glucose +0.0 +0.2 +0.1 N.D. +0.4
growth on oleic acid YNB Oleic Acid +0.1 +0.1 +0.4 N.D. +0.3
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