Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12809 and 12810 are separated by 183 nucleotides
12810 and 12811 are separated by 625 nucleotides
12811 and 12812 are separated by 597 nucleotides
12812 and 12813 are separated by 126 nucleotides
mRNA_4441: 12809 - SUPERFAMILY--SSF52047, at 187,082 to 188,392
12809
mRNA_4442: 12810 - SUPERFAMILY--SSF52047, at 188,576 to 190,157
12810
mRNA_4443: 12811 - SUPERFAMILY--SSF52047, at 190,783 to 192,210
12811
mRNA_4444: 12812 - K14327 UPF2, RENT2 regulator of nonsense transcripts 2, at 192,808 to 197,198
12812
mRNA_4445: 12813 - K16342 PLA2G4, CPLA2 cytosolic phospholipase A2, at 197,325 to 199,939
12813
Group
Condition
mRNA
_4441
mRNA
_4442
mRNA
_4443
mRNA
_4444
mRNA
_4445
12809
12810
12811
12812
12813
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
+0.1
-1.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.4
-0.4
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.5
-0.3
N.D.
+0.0
growth on ypd
YPD
-0.1
-0.1
-0.3
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.2
-0.3
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
-0.4
-0.0
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.0
+0.0
N.D.
+0.2
growth on ricinoleic acid
YNB Glucose
-0.1
-0.0
+0.1
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.3
+0.2
N.D.
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.2
+0.2
N.D.
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.3
-0.1
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.1
+0.0
N.D.
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.2
+0.3
N.D.
-0.1
growth on oleic acid
YNB Glucose
-0.3
+0.1
+0.2
N.D.
+0.2
auxotrophy
Dropout Complete
-0.0
+0.2
+0.2
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.0
+0.1
N.D.
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.5
+0.4
N.D.
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
+0.3
+0.2
N.D.
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.4
+0.0
+0.0
N.D.
+0.2
auxotrophy
YNB Glucose
+0.0
+0.2
+0.1
N.D.
+0.4
growth on oleic acid
YNB Oleic Acid
+0.1
+0.1
+0.4
N.D.
+0.3
remove
mRNA_4441
plot
remove
mRNA_4442
plot
remove
mRNA_4443
remove
mRNA_4444
plot
remove
mRNA_4445
plot