Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12815 and 12816 are separated by 89 nucleotides
12816 and 12817 are separated by 90 nucleotides
12817 and 12818 are separated by 186 nucleotides
12818 and 12819 are separated by 989 nucleotides
mRNA_4447: 12815 - K12666 OST1, RPN1 oligosaccharyltransferase complex subunit alpha (ribophorin I), at 204,059 to 206,130
12815
mRNA_4448: 12816 - KOG3979 FGF receptor activating protein 1, at 206,220 to 210,253
12816
mRNA_4449: 12817 - K14168 CTU1, NCS6 cytoplasmic tRNA 2-thiolation protein 1, at 210,344 to 212,336
12817
mRNA_4450: 12818 - Hypothetical Protein, at 212,523 to 213,518
12818
mRNA_4451: 12819 - K03355 APC8, CDC23 anaphase-promoting complex subunit 8, at 214,508 to 216,794
12819
Group
Condition
mRNA
_4447
mRNA
_4448
mRNA
_4449
mRNA
_4450
mRNA
_4451
12815
12816
12817
12818
12819
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.2
-2.6
+0.0
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.3
-1.3
-0.6
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.0
-0.8
-0.4
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.6
-0.6
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.3
-0.3
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.1
-0.4
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
-0.1
-0.6
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
-0.0
+0.0
-0.6
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.0
-0.5
+0.4
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
-0.1
+0.1
N.D.
growth on ypd
YPD
N.D.
+0.2
+0.1
-0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.0
+0.1
+0.2
N.D.
auxotrophy
YNB Glucose
N.D.
-0.1
+0.4
+0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.0
+0.5
-0.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
+0.5
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.1
+0.3
+0.4
N.D.
auxotrophy
Dropout Complete
N.D.
+0.0
+0.4
+0.5
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.0
+0.6
+0.4
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.3
+1.3
+0.4
N.D.
growth on oleic acid
YNB Glucose
N.D.
+0.2
+0.6
+0.7
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
+0.9
+0.6
N.D.
remove
mRNA_4447
plot
remove
mRNA_4448
plot
remove
mRNA_4449
remove
mRNA_4450
plot
remove
mRNA_4451
plot