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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12816 and 12817 are separated by 90 nucleotides
12817 and 12818 are separated by 186 nucleotides
12818 and 12819 are separated by 989 nucleotides
12819 and 12820 are separated by 370 nucleotides
mRNA_4448: 12816 - KOG3979 FGF receptor activating protein 1, at 206,220 to 210,253
12816
mRNA_4449: 12817 - K14168 CTU1, NCS6 cytoplasmic tRNA 2-thiolation protein 1, at 210,344 to 212,336
12817
mRNA_4450: 12818 - Hypothetical Protein, at 212,523 to 213,518
12818
mRNA_4451: 12819 - K03355 APC8, CDC23 anaphase-promoting complex subunit 8, at 214,508 to 216,794
12819
mRNA_4452: 12820 - K13955 yogA zinc-binding alcohol dehydrogenase/oxidoreductase, at 217,165 to 218,716
12820
Group
Condition
mRNA
_4448
mRNA
_4449
mRNA
_4450
mRNA
_4451
mRNA
_4452
12816
12817
12818
12819
12820
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-1.3
-0.6
N.D.
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-2.6
+0.0
N.D.
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
-0.6
+0.0
N.D.
-0.6
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.4
-0.2
N.D.
-0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.8
-0.4
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.3
-0.3
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.1
-0.6
N.D.
-0.2
growth on ricinoleic acid
YNB Glucose
-0.0
+0.0
-0.6
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
+0.1
N.D.
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.5
+0.4
N.D.
-0.0
growth on ypd
YPD
+0.2
+0.1
-0.2
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.1
+0.2
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.5
-0.0
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.3
+0.4
N.D.
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.5
+0.3
N.D.
+0.1
auxotrophy
YNB Glucose
-0.1
+0.4
+0.2
N.D.
+0.4
auxotrophy
Dropout Complete
+0.0
+0.4
+0.5
N.D.
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
+1.3
+0.4
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.6
+0.4
N.D.
+0.4
growth on oleic acid
YNB Glucose
+0.2
+0.6
+0.7
N.D.
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
+0.9
+0.6
N.D.
+0.3
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