Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12816 and 12817 are separated by 90 nucleotides12817 and 12818 are separated by 186 nucleotides12818 and 12819 are separated by 989 nucleotides12819 and 12820 are separated by 370 nucleotides mRNA_4448: 12816 - KOG3979 FGF receptor activating protein 1, at 206,220 to 210,253 12816 mRNA_4449: 12817 - K14168 CTU1, NCS6 cytoplasmic tRNA 2-thiolation protein 1, at 210,344 to 212,336 12817 mRNA_4450: 12818 - Hypothetical Protein, at 212,523 to 213,518 12818 mRNA_4451: 12819 - K03355 APC8, CDC23 anaphase-promoting complex subunit 8, at 214,508 to 216,794 12819 mRNA_4452: 12820 - K13955 yogA zinc-binding alcohol dehydrogenase/oxidoreductase, at 217,165 to 218,716 12820
Group Condition mRNA_4448 mRNA_4449 mRNA_4450 mRNA_4451 mRNA_4452
12816 12817 12818 12819 12820
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -1.3 -0.6 N.D. -0.6
ypd buoyancy 40 hrs Low Buoyancy -0.2 -2.6 +0.0 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.6 +0.0 N.D. -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.4 -0.2 N.D. -0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.8 -0.4 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 -0.3 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.1 -0.6 N.D. -0.2
growth on ricinoleic acid YNB Glucose -0.0 +0.0 -0.6 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 +0.1 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.5 +0.4 N.D. -0.0
growth on ypd YPD +0.2 +0.1 -0.2 N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.1 +0.2 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.5 -0.0 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.3 +0.4 N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.5 +0.3 N.D. +0.1
auxotrophy YNB Glucose -0.1 +0.4 +0.2 N.D. +0.4
auxotrophy Dropout Complete +0.0 +0.4 +0.5 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +1.3 +0.4 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.6 +0.4 N.D. +0.4
growth on oleic acid YNB Glucose +0.2 +0.6 +0.7 N.D. +0.0
growth on oleic acid YNB Oleic Acid +0.1 +0.9 +0.6 N.D. +0.3
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