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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
12818 and 12819 are separated by 989 nucleotides
12819 and 12820 are separated by 370 nucleotides
12820 and 12821 are separated by 169 nucleotides
12821 and 12822 are separated by 869 nucleotides
mRNA_4450: 12818 - Hypothetical Protein, at 212,523 to 213,518
12818
mRNA_4451: 12819 - K03355 APC8, CDC23 anaphase-promoting complex subunit 8, at 214,508 to 216,794
12819
mRNA_4452: 12820 - K13955 yogA zinc-binding alcohol dehydrogenase/oxidoreductase, at 217,165 to 218,716
12820
mRNA_4453: 12821 - KOG3855 Monooxygenase involved in coenzyme Q (ubiquinone) biosynthesis, at 218,886 to 222,303
12821
mRNA_4454: 12822 - K03380 E1.14.13.7 phenol 2-monooxygenase, at 223,173 to 226,550
12822
Group
Condition
mRNA
_4450
mRNA
_4451
mRNA
_4452
mRNA
_4453
mRNA
_4454
12818
12819
12820
12821
12822
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
N.D.
-0.6
-0.1
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
N.D.
-0.8
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
N.D.
-0.2
-0.1
-0.0
growth on ricinoleic acid
YNB Glucose
-0.6
N.D.
+0.2
-0.0
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
N.D.
-0.6
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
N.D.
-0.2
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
N.D.
+0.1
-0.0
+0.1
growth on ypd
YPD
-0.2
N.D.
-0.1
-0.1
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
N.D.
+0.2
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
N.D.
-0.1
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
-0.2
-0.1
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
N.D.
-0.1
+0.1
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.4
N.D.
-0.0
+0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.4
N.D.
-0.0
+0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
N.D.
-0.1
+0.3
+0.1
auxotrophy
YNB Glucose
+0.2
N.D.
+0.4
+0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
N.D.
+0.1
+0.2
+0.1
growth on oleic acid
YNB Glucose
+0.7
N.D.
+0.0
+0.1
-0.0
auxotrophy
Dropout Complete
+0.5
N.D.
+0.0
+0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.4
N.D.
+0.4
+0.3
+0.0
growth on oleic acid
YNB Oleic Acid
+0.6
N.D.
+0.3
+0.1
+0.2
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