Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12822 and 12823 are separated by 185 nucleotides12823 and 12824 are separated by 120 nucleotides12824 and 12825 are separated by 681 nucleotides12825 and 12826 are separated by 285 nucleotides mRNA_4454: 12822 - K03380 E1.14.13.7 phenol 2-monooxygenase, at 223,173 to 226,550 12822 mRNA_4455: 12823 - K08489 STX16 syntaxin 16, at 226,736 to 228,552 12823 mRNA_4456: 12824 - BLAST C-x8-C-x5-C-x3-H type zinc finger protein [Nanniz..., at 228,673 to 230,476 12824 mRNA_4457: 12825 - K14709 SLC39A1_2_3, ZIP1_2_3 solute carrier family 39 (zinc transporter), member 1/2/3, at 231,158 to 232,825 12825 mRNA_4458: 12826 - K08762 DBI, ACBP diazepam-binding inhibitor (GABA receptor modulator, acyl-CoA-binding protein), at 233,111 to 233,901 12826
Group Condition mRNA_4454 mRNA_4455 mRNA_4456 mRNA_4457 mRNA_4458
12822 12823 12824 12825 12826
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.5 +0.2 -0.3 N.D.
growth on oleic acid YNB Glucose -0.0 +0.2 -0.2 -0.5 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.4 -0.1 -0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.2 -0.1 +0.1 -0.4 N.D.
auxotrophy YNB Glucose -0.2 -0.1 +0.1 -0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.2 +0.1 -0.2 -0.5 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 +0.1 -0.2 +0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 -0.1 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.0 -0.1 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.0 -0.2 +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.0 -0.3 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 -0.1 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 +0.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.2 +0.4 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.2 -0.0 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.3 +0.3 +0.2 N.D.
auxotrophy Dropout Complete +0.1 +0.3 -0.0 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 +0.1 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.3 -0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.3 -0.1 +0.1 N.D.
growth on ypd YPD +0.2 +0.5 -0.0 +0.4 N.D.
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