Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12836 and 12837 are separated by 302 nucleotides12837 and 12838 are separated by 475 nucleotides12838 and 12839 are separated by 1122 nucleotides12839 and 12840 are separated by 1690 nucleotides mRNA_4468: 12836 - K11866 STAMBP, AMSH STAM-binding protein, at 252,215 to 253,594 12836 mRNA_4469: 12837 - Hypothetical Protein, at 253,897 to 255,507 12837 mRNA_4470: 12838 - K05292 PIGT phosphatidylinositol glycan, class T, at 255,983 to 257,580 12838 mRNA_4471: 12839 - Hypothetical Protein, at 258,703 to 259,601 12839 mRNA_4472: 12840 - Hypothetical Protein, at 261,292 to 263,217 12840
Group Condition mRNA_4468 mRNA_4469 mRNA_4470 mRNA_4471 mRNA_4472
12836 12837 12838 12839 12840
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.2 N.D. -0.4 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.1 N.D. -0.6 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.5 N.D. -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.2 N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.4 N.D. +0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.3 N.D. -0.2 -0.1
growth on ricinoleic acid YNB Glucose +0.3 -0.2 N.D. -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.3 N.D. -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.5 -0.1 N.D. -0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.4 N.D. -0.1 -0.0
auxotrophy Dropout Complete -0.5 +0.4 N.D. +0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 -0.4 N.D. -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 N.D. -0.2 +0.2
auxotrophy YNB Glucose -0.4 +0.4 N.D. +0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.8 +0.7 N.D. +0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 -0.2 N.D. -0.2 +0.0
growth on oleic acid YNB Glucose +0.4 -0.2 N.D. -0.0 +0.2
growth on ypd YPD +0.3 -0.1 N.D. -0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.6 -0.2 N.D. +0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.7 -0.2 N.D. -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.0 -0.2 N.D. -0.0 +0.1
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