Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12840 and 12841 are separated by 2194 nucleotides12841 and 12842 are separated by 138 nucleotides12842 and 12843 are separated by 642 nucleotides12843 and 12844 are separated by 263 nucleotides mRNA_4472: 12840 - Hypothetical Protein, at 261,292 to 263,217 12840 mRNA_4473: 12841 - K19782 DSS1, MSU1 exoribonuclease II, mitochondrial, at 265,412 to 268,856 12841 mRNA_4474: 12842 - K01426 E3.5.1.4, amiE amidase, at 268,995 to 271,231 12842 mRNA_4475: 12843 - K05917 CYP51 sterol 14-demethylase, at 271,874 to 274,192 12843 mRNA_4476: 12844 - HMMPfam-Domain of unknown function (DUF543)-PF04418, at 274,456 to 275,559 12844
Group Condition mRNA_4472 mRNA_4473 mRNA_4474 mRNA_4475 mRNA_4476
12840 12841 12842 12843 12844
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 N.D. -0.1 N.D. -1.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +0.1 N.D. -1.2
growth on ricinoleic acid YNB Glucose -0.2 N.D. -0.0 N.D. -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. +0.0 N.D. -0.2
auxotrophy YNB Glucose -0.2 N.D. +0.1 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. +0.1 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. -0.2 N.D. +0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 N.D. -0.2 N.D. -0.0
growth on oleic acid YNB Oleic Acid +0.2 N.D. +0.5 N.D. -0.7
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. +0.2 N.D. -0.2
auxotrophy Dropout Complete -0.3 N.D. +0.0 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. +0.1 N.D. -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.0 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.0 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. +0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. +0.4 N.D. +0.1
growth on oleic acid YNB Glucose +0.2 N.D. +0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. +0.1 N.D. +0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.2 N.D. +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. +0.1 N.D. +0.6
growth on ypd YPD +0.3 N.D. -0.0 N.D. +0.4
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