Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12841 and 12842 are separated by 138 nucleotides12842 and 12843 are separated by 642 nucleotides12843 and 12844 are separated by 263 nucleotides12844 and 12845 are separated by 570 nucleotides mRNA_4473: 12841 - K19782 DSS1, MSU1 exoribonuclease II, mitochondrial, at 265,412 to 268,856 12841 mRNA_4474: 12842 - K01426 E3.5.1.4, amiE amidase, at 268,995 to 271,231 12842 mRNA_4475: 12843 - K05917 CYP51 sterol 14-demethylase, at 271,874 to 274,192 12843 mRNA_4476: 12844 - HMMPfam-Domain of unknown function (DUF543)-PF04418, at 274,456 to 275,559 12844 mRNA_4477: 12845 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 276,130 to 277,462 12845
Group Condition mRNA_4473 mRNA_4474 mRNA_4475 mRNA_4476 mRNA_4477
12841 12842 12843 12844 12845
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 N.D. -1.9 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 N.D. -1.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.0 N.D. -0.2 -1.0
growth on ricinoleic acid YNB Glucose N.D. -0.0 N.D. -0.6 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 N.D. -0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 N.D. +0.1 -0.4
auxotrophy YNB Glucose N.D. +0.1 N.D. -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 N.D. -0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 N.D. -0.4 +0.2
auxotrophy Dropout Complete N.D. +0.0 N.D. +0.2 -0.3
growth on ypd YPD N.D. -0.0 N.D. +0.4 -0.4
growth on oleic acid YNB Oleic Acid N.D. +0.5 N.D. -0.7 +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 N.D. +0.0 +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 N.D. +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 N.D. -0.2 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 N.D. +0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.1 N.D. +0.5 -0.0
growth on oleic acid YNB Glucose N.D. +0.2 N.D. -0.2 +0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 N.D. +0.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 N.D. +0.1 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 N.D. +0.6 +0.5
remove
mRNA_4473
plot
remove
mRNA_4474
plot
remove
mRNA_4475
remove
mRNA_4476
plot
remove
mRNA_4477
plot