Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 12842 and 12843 are separated by 642 nucleotides12843 and 12844 are separated by 263 nucleotides12844 and 12845 are separated by 570 nucleotides12845 and 12846 are separated by 511 nucleotides mRNA_4474: 12842 - K01426 E3.5.1.4, amiE amidase, at 268,995 to 271,231 12842 mRNA_4475: 12843 - K05917 CYP51 sterol 14-demethylase, at 271,874 to 274,192 12843 mRNA_4476: 12844 - HMMPfam-Domain of unknown function (DUF543)-PF04418, at 274,456 to 275,559 12844 mRNA_4477: 12845 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 276,130 to 277,462 12845 mRNA_4478: 12846 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 277,974 to 281,759 12846
Group Condition mRNA_4474 mRNA_4475 mRNA_4476 mRNA_4477 mRNA_4478
12842 12843 12844 12845 12846
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. -1.9 -0.3 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. -0.2 -1.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. -1.2 -0.2 +0.2
growth on ricinoleic acid YNB Glucose -0.0 N.D. -0.6 -0.4 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. +0.1 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. -0.2 +0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.0 N.D. +0.2 -0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. -0.2 -0.4 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. -0.0 +0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.4 +0.2 +0.1
auxotrophy YNB Glucose +0.1 N.D. -0.3 -0.2 +0.4
growth on oleic acid YNB Oleic Acid +0.5 N.D. -0.7 +0.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. +0.0 +0.3 +0.2
growth on ypd YPD -0.0 N.D. +0.4 -0.4 +0.3
auxotrophy Dropout Complete +0.0 N.D. +0.2 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. +0.5 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 N.D. +0.1 +0.6 -0.5
growth on oleic acid YNB Glucose +0.2 N.D. -0.2 +0.5 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. +0.4 +0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.1 +0.0 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. +0.6 +0.5 -0.1
remove
mRNA_4474
plot
remove
mRNA_4475
plot
remove
mRNA_4476
remove
mRNA_4477
plot
remove
mRNA_4478
plot