Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12842 and 12843 are separated by 642 nucleotides
12843 and 12844 are separated by 263 nucleotides
12844 and 12845 are separated by 570 nucleotides
12845 and 12846 are separated by 511 nucleotides
mRNA_4474: 12842 - K01426 E3.5.1.4, amiE amidase, at 268,995 to 271,231
12842
mRNA_4475: 12843 - K05917 CYP51 sterol 14-demethylase, at 271,874 to 274,192
12843
mRNA_4476: 12844 - HMMPfam-Domain of unknown function (DUF543)-PF04418, at 274,456 to 275,559
12844
mRNA_4477: 12845 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 276,130 to 277,462
12845
mRNA_4478: 12846 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 277,974 to 281,759
12846
Group
Condition
mRNA
_4474
mRNA
_4475
mRNA
_4476
mRNA
_4477
mRNA
_4478
12842
12843
12844
12845
12846
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
N.D.
-1.9
-0.3
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
N.D.
-0.2
-1.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
N.D.
-1.2
-0.2
+0.2
growth on ricinoleic acid
YNB Glucose
-0.0
N.D.
-0.6
-0.4
-0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
N.D.
+0.1
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
N.D.
-0.2
+0.3
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
N.D.
+0.2
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
-0.2
-0.4
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
N.D.
-0.0
+0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
-0.4
+0.2
+0.1
auxotrophy
YNB Glucose
+0.1
N.D.
-0.3
-0.2
+0.4
growth on oleic acid
YNB Oleic Acid
+0.5
N.D.
-0.7
+0.3
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
N.D.
+0.0
+0.3
+0.2
growth on ypd
YPD
-0.0
N.D.
+0.4
-0.4
+0.3
auxotrophy
Dropout Complete
+0.0
N.D.
+0.2
-0.3
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
N.D.
+0.5
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
N.D.
+0.1
+0.6
-0.5
growth on oleic acid
YNB Glucose
+0.2
N.D.
-0.2
+0.5
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
+0.4
+0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.2
N.D.
+0.1
+0.0
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
N.D.
+0.6
+0.5
-0.1
remove
mRNA_4474
plot
remove
mRNA_4475
plot
remove
mRNA_4476
remove
mRNA_4477
plot
remove
mRNA_4478
plot