Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 12843 and 12844 are separated by 263 nucleotides12844 and 12845 are separated by 570 nucleotides12845 and 12846 are separated by 511 nucleotides12846 and 12847 are separated by 606 nucleotides mRNA_4475: 12843 - K05917 CYP51 sterol 14-demethylase, at 271,874 to 274,192 12843 mRNA_4476: 12844 - HMMPfam-Domain of unknown function (DUF543)-PF04418, at 274,456 to 275,559 12844 mRNA_4477: 12845 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 276,130 to 277,462 12845 mRNA_4478: 12846 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 277,974 to 281,759 12846 mRNA_4479: 12847 - K17290 HTATIP2 oxidoreductase, at 282,366 to 283,335 12847
Group Condition mRNA_4475 mRNA_4476 mRNA_4477 mRNA_4478 mRNA_4479
12843 12844 12845 12846 12847
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.9 -0.3 +0.2 -1.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.5 -0.0 -0.0 -3.9
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.2 -1.0 -0.2 -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -1.2 -0.2 +0.2 -0.7
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 +0.3 +0.2 -1.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 +0.3 -0.3 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.0 +0.2 +0.1 -0.9
growth on oleic acid YNB Oleic Acid N.D. -0.7 +0.3 +0.1 -0.2
growth on ricinoleic acid YNB Glucose N.D. -0.6 -0.4 -0.0 +0.5
growth on ypd YPD N.D. +0.4 -0.4 +0.3 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.6 +0.5 -0.1 -1.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 -0.0 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 +0.6 -0.5 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.4 +0.2 +0.1 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 +0.0 +0.4 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.4 +0.4 +0.6
auxotrophy YNB Glucose N.D. -0.3 -0.2 +0.4 +0.6
growth on oleic acid YNB Glucose N.D. -0.2 +0.5 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 -0.4 -0.2 +1.3
auxotrophy Dropout Complete N.D. +0.2 -0.3 +0.3 +0.7
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.4 +0.1 -0.0 +0.8
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