Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
12845 and 12846 are separated by 511 nucleotides
12846 and 12847 are separated by 606 nucleotides
12847 and 12848 are separated by 496 nucleotides
12848 and 12849 are separated by 199 nucleotides
mRNA_4477: 12845 - HMMPfam-CFEM domain-PF05730,SMART--SM00747, at 276,130 to 277,462
12845
mRNA_4478: 12846 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 277,974 to 281,759
12846
mRNA_4479: 12847 - K17290 HTATIP2 oxidoreductase, at 282,366 to 283,335
12847
mRNA_4480: 12848 - Hypothetical Protein, at 283,832 to 284,551
12848
mRNA_4481: 12849 - Hypothetical Protein, at 284,751 to 285,386
12849
Group
Condition
mRNA
_4477
mRNA
_4478
mRNA
_4479
mRNA
_4480
mRNA
_4481
12845
12846
12847
12848
12849
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.0
-3.9
-0.0
+0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
-0.2
-0.9
-0.2
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.2
-1.6
+0.0
+0.5
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
+0.2
-1.6
-0.1
+0.4
growth on ypd
YPD
-0.4
+0.3
-0.6
+0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.1
-0.9
-0.1
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.2
-0.7
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
-0.1
-1.2
+0.1
+0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.4
-0.3
+0.1
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.2
+0.1
-0.0
+0.0
growth on ricinoleic acid
YNB Glucose
-0.4
-0.0
+0.5
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.3
-0.6
-0.0
+0.8
auxotrophy
Dropout Complete
-0.3
+0.3
+0.7
+0.1
-0.5
ypd buoyancy
40 hrs High Buoyancy
-0.4
-0.2
+1.3
+0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.4
+0.6
+0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.1
+0.3
+0.2
-0.2
auxotrophy
YNB Glucose
-0.2
+0.4
+0.6
+0.1
-0.4
growth on oleic acid
YNB Oleic Acid
+0.3
+0.1
-0.2
+0.2
+0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
-0.5
-0.1
-0.0
+0.9
growth on oleic acid
YNB Glucose
+0.5
+0.1
+0.2
+0.2
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
+0.8
+0.2
-0.0
remove
mRNA_4477
plot
remove
mRNA_4478
plot
remove
mRNA_4479
remove
mRNA_4480
plot
remove
mRNA_4481
plot